Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_B03
(302 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 26 4.5
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 26 4.5
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 26 4.5
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 26 4.5
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 26 4.5
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 26 4.5
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 26 4.5
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 26 4.5
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 26 4.5
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 26 4.5
Z82285-7|CAB05301.1| 548|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 25 7.9
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 25 7.9
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 25 7.9
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 133 NDCLKSDYVYDKDPSPVDQQQQ 198
N+C+K+DYV D +P D+ +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 133 NDCLKSDYVYDKDPSPVDQQQQ 198
N+C+K+DYV D +P D+ +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 133 NDCLKSDYVYDKDPSPVDQQQQ 198
N+C+K+DYV D +P D+ +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 133 NDCLKSDYVYDKDPSPVDQQQQ 198
N+C+K+DYV D +P D+ +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical
protein ZC101.2b protein.
Length = 1160
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 133 NDCLKSDYVYDKDPSPVDQQQQ 198
N+C+K+DYV D +P D+ +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 133 NDCLKSDYVYDKDPSPVDQQQQ 198
N+C+K+DYV D +P D+ +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 133 NDCLKSDYVYDKDPSPVDQQQQ 198
N+C+K+DYV D +P D+ +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 133 NDCLKSDYVYDKDPSPVDQQQQ 198
N+C+K+DYV D +P D+ +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 133 NDCLKSDYVYDKDPSPVDQQQQ 198
N+C+K+DYV D +P D+ +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 133 NDCLKSDYVYDKDPSPVDQQQQ 198
N+C+K+DYV D +P D+ +
Sbjct: 159 NECVKNDYVCDGEPDCRDRSDE 180
>Z82285-7|CAB05301.1| 548|Caenorhabditis elegans Hypothetical
protein T28F3.8 protein.
Length = 548
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 208 FIITAAVGLPGWGLYHIHN 152
F IT +VGL GWG ++ N
Sbjct: 269 FTITISVGLNGWGNFNYTN 287
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = -2
Query: 178 GWGLYHIHNLTLGNHYRRSLTDRWXRALXQRDMRL 74
G+G YHIH + + ++ +D W +++ +L
Sbjct: 285 GYGTYHIH--VVARNQKKQRSDAWLEISVKKEQKL 317
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = -2
Query: 178 GWGLYHIHNLTLGNHYRRSLTDRWXRALXQRDMRL 74
G+G YHIH + + ++ +D W +++ +L
Sbjct: 285 GYGTYHIH--VVARNQKKQRSDAWLEISVKKEQKL 317
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = -2
Query: 178 GWGLYHIHNLTLGNHYRRSLTDRWXRALXQRDMRL 74
G+G YHIH + + ++ +D W +++ +L
Sbjct: 285 GYGTYHIH--VVARNQKKQRSDAWLEISVKKEQKL 317
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = -2
Query: 178 GWGLYHIHNLTLGNHYRRSLTDRWXRALXQRDMRL 74
G+G YHIH + + ++ +D W +++ +L
Sbjct: 285 GYGTYHIH--VVARNQKKQRSDAWLEISVKKEQKL 317
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,452,785
Number of Sequences: 27780
Number of extensions: 109232
Number of successful extensions: 282
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 282
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 323867940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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