Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_B01
         (690 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    24   1.6  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   2.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   2.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.3  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    21   8.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   8.4  

>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 679 TIGNLNELTKPVEYFLHK 626
           TI  L ELTK  ++FLHK
Sbjct: 266 TIDRLYELTKIDKWFLHK 283


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 497 NKRMCNDHIISFENTNKDVLKCYSI 571
           N RM ND++ +F    +D    Y+I
Sbjct: 481 NTRMLNDNVFAFSRETEDNGSLYAI 505


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 497 NKRMCNDHIISFENTNKDVLKCYSI 571
           N RM ND++ +F    +D    Y+I
Sbjct: 481 NTRMLNDNVFAFSRETEDNGSLYAI 505


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = -1

Query: 477  NGEKDELEN*KSYQEIKKIQIV 412
            NGEK  +   K+YQ++++ +I+
Sbjct: 1532 NGEKIVVSRNKAYQKVEENEII 1553


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 353 DLNFLLHLCCV 321
           +LNF+LHL C+
Sbjct: 279 NLNFILHLFCL 289


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +2

Query: 497 NKRMCNDHIISFENTNKDVLKC 562
           N ++C++   S+ + NK + KC
Sbjct: 652 NVQLCSEISESYSSNNKTLCKC 673


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,791
Number of Sequences: 438
Number of extensions: 3572
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)