Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_A22
(665 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 30 0.017
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 30 0.023
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 24 1.1
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 24 1.1
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 24 1.1
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 2.0
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 2.0
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 2.0
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 2.0
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 2.0
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 3.5
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 4.6
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 6.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 6.0
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 8.0
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 8.0
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 8.0
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 8.0
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 8.0
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 8.0
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 8.0
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 30.3 bits (65), Expect = 0.017
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = -3
Query: 513 AAPALHAAPVSYSAPIAKVAVE-EYDAHPQYSFAYDVQDGVTGDSKSQHETRDGD---VV 346
AAP + A I +E +D + Y ++ +G++ Q + D + V
Sbjct: 14 AAPQRPSGGADKDAVITSQQLEVNFDGN--YINNFETSNGISHQESGQPKQVDNETPVVS 71
Query: 345 QGSYSVVDPDGIKRTVEYTADPHNGF 268
QGS S PDG + ++ Y AD NGF
Sbjct: 72 QGSDSYTAPDGQQVSITYVAD-ENGF 96
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 29.9 bits (64), Expect = 0.023
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = -1
Query: 422 VSHTTYKMASLVTRRVNTRPATAMSFKALTPWLTPMASSAPLNTPPIPTTAS 267
VSHT YK+ ++ R + P T F+ T +AS P PP+PT S
Sbjct: 146 VSHTLYKLDEIIERNGDKPPLTYHQFQ------TVVASMDP-PEPPVPTVTS 190
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -1
Query: 497 TQHQCRTPPPLLKSLSKNTMHTLNTVSHTTY 405
T+ + P ++ SLS T+H N ++ Y
Sbjct: 71 TERERSREPKIISSLSNKTIHNNNNYNNNNY 101
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -1
Query: 497 TQHQCRTPPPLLKSLSKNTMHTLNTVSHTTY 405
T+ + P ++ SLS T+H N ++ Y
Sbjct: 71 TERERSREPKIISSLSNKTIHNNNNYNNNNY 101
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -1
Query: 497 TQHQCRTPPPLLKSLSKNTMHTLNTVSHTTY 405
T+ + P ++ SLS T+H N ++ Y
Sbjct: 304 TERERSREPKIISSLSNKTIHNNNNYNNNNY 334
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 497 TQHQCRTPPPLLKSLSKNTMHTLN 426
T+ + P ++ SLS NT+H N
Sbjct: 70 TERERSREPKIISSLSNNTIHNNN 93
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 497 TQHQCRTPPPLLKSLSKNTMHTLN 426
T+ + P ++ SLS NT+H N
Sbjct: 71 TERERSREPKIISSLSNNTIHNNN 94
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 497 TQHQCRTPPPLLKSLSKNTMHTLN 426
T+ + P ++ SLS NT+H N
Sbjct: 71 TERERSREPKIISSLSNNTIHNNN 94
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 497 TQHQCRTPPPLLKSLSKNTMHTLN 426
T+ + P ++ SLS NT+H N
Sbjct: 71 TERERSREPKIISSLSNNTIHNNN 94
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 497 TQHQCRTPPPLLKSLSKNTMHTLN 426
T+ + P ++ SLS NT+H N
Sbjct: 71 TERERSREPKIISSLSNNTIHNNN 94
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -1
Query: 473 PPLLKSLSKNTMHTLNTVSHTTYKMASL 390
P ++ SLS NT+H N Y + ++
Sbjct: 312 PKIISSLSNNTIHNNNYNKKLYYNIINI 339
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 473 PPLLKSLSKNTMHTLN 426
P ++ SLS NT+H N
Sbjct: 78 PKIISSLSNNTIHNNN 93
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/19 (36%), Positives = 9/19 (47%)
Frame = -1
Query: 509 HPHCTQHQCRTPPPLLKSL 453
H H C +PPP S+
Sbjct: 1743 HEHAMTEGCASPPPAATSM 1761
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/19 (36%), Positives = 9/19 (47%)
Frame = -1
Query: 509 HPHCTQHQCRTPPPLLKSL 453
H H C +PPP S+
Sbjct: 1739 HEHAMTEGCASPPPAATSM 1757
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = -1
Query: 497 TQHQCRTPPPLLKSLSKNTMHTLNTVSH 414
T+ + P ++ SLS T+H N +
Sbjct: 71 TERERSREPKIISSLSNKTIHNNNNYKY 98
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = -1
Query: 497 TQHQCRTPPPLLKSLSKNTMHTLNTVSH 414
T+ + P ++ SLS T+H N +
Sbjct: 71 TERERSREPKIISSLSNKTIHNNNNYKY 98
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = -1
Query: 497 TQHQCRTPPPLLKSLSKNTMHTLNTVSH 414
T+ + P ++ SLS T+H N +
Sbjct: 71 TERERSREPKIISSLSNRTIHNNNNYKY 98
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = -1
Query: 497 TQHQCRTPPPLLKSLSKNTMHTLNTVSH 414
T+ + P ++ SLS T+H N +
Sbjct: 71 TERERSREPKIISSLSNKTIHNNNNYKY 98
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = -1
Query: 497 TQHQCRTPPPLLKSLSKNTMHTLNTVSH 414
T+ + P ++ SLS T+H N +
Sbjct: 71 TERERSREPKIISSLSNKTIHNNNNYKY 98
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = -1
Query: 497 TQHQCRTPPPLLKSLSKNTMHTLNTVSH 414
T+ + P ++ SLS T+H N +
Sbjct: 71 TERERSREPKIISSLSNKTIHNNNNYKY 98
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = -1
Query: 497 TQHQCRTPPPLLKSLSKNTMHTLNTVSH 414
T+ + P ++ SLS T+H N +
Sbjct: 304 TERERSREPKIISSLSNKTIHNNNNYKY 331
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,888
Number of Sequences: 438
Number of extensions: 3640
Number of successful extensions: 24
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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