Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_A13
(534 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 62 4e-11
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 56 4e-09
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 50 2e-07
SPBC17D1.02 |||diphthamide biosynthesis protein |Schizosaccharom... 31 0.14
SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr 2|... 28 0.76
SPBC56F2.01 |pof12||F-box protein Pof12|Schizosaccharomyces pomb... 28 1.0
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 28 1.0
SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces... 26 3.1
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 26 3.1
SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 3.1
SPCPB1C11.02 |||amino acid permease, unknown 16|Schizosaccharomy... 26 3.1
SPBC2D10.09 |||3-hydroxyisobutyryl-CoA hydrolase|Schizosaccharom... 26 4.1
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 25 5.4
SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|... 25 5.4
SPBP8B7.10c |||U3 snoRNP-associated protein Utp16 |Schizosacchar... 25 9.4
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 25 9.4
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 9.4
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 62.5 bits (145), Expect = 4e-11
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = -1
Query: 531 AALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSD-PIKANEMLSKIPLGRFGEI 355
A L+ LT+A+A+ GP GIRVN P I + + P + M P+GR G
Sbjct: 150 AGLENLTKALAVRYGPLGIRVNVCAPGTIWSPAWDERFKKHPDVGDRMKRWYPVGRLGTP 209
Query: 354 SEVVNAVVFLLSERSSMINGVELPIDGGFLA 262
+V AV+FL ++S I G L +DGG LA
Sbjct: 210 EDVARAVIFLADSKNSFITGTTLYVDGGLLA 240
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 55.6 bits (128), Expect = 4e-09
Identities = 35/87 (40%), Positives = 48/87 (55%)
Frame = -1
Query: 531 AALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSDPIKANEMLSKIPLGRFGEIS 352
A L++ T+ +A E+ GIRVNAI+P + T M S I+A K+P+GR
Sbjct: 156 AGLESFTKVLAAEVASKGIRVNAISPGYVDTPML----SSQIRAIAE-KKVPIGRLASTD 210
Query: 351 EVVNAVVFLLSERSSMINGVELPIDGG 271
E+V+A FLL R + G LPI GG
Sbjct: 211 EIVDACTFLLDNRYT--TGTILPITGG 235
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 50.4 bits (115), Expect = 2e-07
Identities = 29/86 (33%), Positives = 46/86 (53%)
Frame = -1
Query: 528 ALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSDPIKANEMLSKIPLGRFGEISE 349
A+ A TR ++ + +GIRVNA+ P I T + V + P + E+ ++PLGR G+ E
Sbjct: 198 AITAFTRGLSNQYAQHGIRVNAVAPGPIYTPL--VSSTFPKEKIELSDQVPLGRMGQPVE 255
Query: 348 VVNAVVFLLSERSSMINGVELPIDGG 271
V + +FL + G L +GG
Sbjct: 256 VASCYLFLACSDGGYMTGQTLHPNGG 281
>SPBC17D1.02 |||diphthamide biosynthesis protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 503
Score = 30.7 bits (66), Expect = 0.14
Identities = 17/67 (25%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 308 LDLSLRRKTTAFTTSDISPNLPSGI-LESISLAFIGSDQPTLAISVIITVGLIAFTLIPY 484
++ +L +T++T + +LP + L+ ++L +IG D PTL+ S++++ + + +
Sbjct: 185 IEPNLEEASTSYTIPGRTYSLPKSLSLQDMTLLYIGPDSPTLS-SILMSHYSLVNQFLSF 243
Query: 485 GPSSKAI 505
P S I
Sbjct: 244 DPLSNKI 250
>SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr
2|||Manual
Length = 482
Score = 28.3 bits (60), Expect = 0.76
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 362 PNLPSGILESISLAFIGSDQPTLAISVIITVGLIAFTLIPYGPSSKAIA 508
PN P L IS A Q ++ +GL+ L+PY PS + A
Sbjct: 334 PN-PMNFLRRISKADFYDIQTRTVAKYLVEIGLLDHKLLPYPPSQQCAA 381
>SPBC56F2.01 |pof12||F-box protein Pof12|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 440
Score = 27.9 bits (59), Expect = 1.0
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -1
Query: 174 VQKKHSENNQ-RLKMLKNIFGHICITKKMSNIFS 76
+Q+ +S NN+ R+K L + GH+C ++S +FS
Sbjct: 330 LQRLYSTNNELRIKFLGRLLGHVC-GVQISKLFS 362
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 27.9 bits (59), Expect = 1.0
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 6/100 (6%)
Frame = +2
Query: 212 PYNSQVFWYDNIFRYYVARKPPSMGNSTPLIILDLSLRRKTTAFTTSDISPN------LP 373
PY++ V V PP+ S+ I + S+ +++FTT+ SP LP
Sbjct: 171 PYSTDVSVSTGTSTDIVTLPPPASSTSSFSTITNTSMIPSSSSFTTTTGSPYYNTSSFLP 230
Query: 374 SGILESISLAFIGSDQPTLAISVIITVGLIAFTLIPYGPS 493
S ++ S SL+ ++ S V + + +L + PS
Sbjct: 231 SSVISSASLSSSSVLPTSIITSTSTPVTVSSSSLSSFTPS 270
>SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1441
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 164 FFCTFVNCNNISKYIKPYNSQVFWYDNIFRYYVARKPPSMGNSTP 298
F C VN + + + P + +V+ NI + Y+A + ++G P
Sbjct: 1333 FSCVMVNSDGGLQMLVPISDRVYRRLNIIQNYLANRVNTIGGLNP 1377
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 26.2 bits (55), Expect = 3.1
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -1
Query: 531 AALDALTRAMALELGPYGIRVNAINPTVIMTEM 433
AAL A + + +EL P+G++V +I + T++
Sbjct: 153 AALLAYSNTLRIELAPFGVQVTSIMTGGVQTKI 185
>SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 137 FNLWLFSLCFFCTFVNCNNISKYIKPYNSQVFWYDNIFRYY 259
F W F FF + +I+ +I PY+S V + F Y+
Sbjct: 74 FFYWFFFFFFFFSHCRRFHIAIFIHPYDSNVVPFFCFFFYF 114
>SPCPB1C11.02 |||amino acid permease, unknown 16|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 505
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/40 (32%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = -1
Query: 408 IKANEMLSKIPLGRFGEISEVVNAV-VFLLSERSSMINGV 292
+ AN +L+ +P+G FGEI ++++ VF ++ + ++NG+
Sbjct: 156 LSANIILNMLPVGGFGEIEYWLSSIKVFTVA--AFIVNGI 193
>SPBC2D10.09 |||3-hydroxyisobutyryl-CoA
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 429
Score = 25.8 bits (54), Expect = 4.1
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +2
Query: 221 SQVFWYDNIFRYYVARKP 274
S+ F+YD+I YY+ ++P
Sbjct: 347 SEAFYYDHIVSYYMLKQP 364
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 25.4 bits (53), Expect = 5.4
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +2
Query: 290 STPLIILDLSLRRKTTAFTTSDISPNLPSGILESISLAFIGSDQPTLAIS 439
S P L RKT A+T S + + S +IS F+ D P I+
Sbjct: 574 SPPSFHATQDLLRKTLAYTNSSGTSTVLSNDSSAISSTFLDRDFPDFGIT 623
>SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 664
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 63 SQQLKRRYLTFFWLYIYGQKYF 128
++++ RRY FFWL+ Y K +
Sbjct: 314 TREVLRRYSDFFWLHSYLMKKY 335
>SPBP8B7.10c |||U3 snoRNP-associated protein Utp16
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 346
Score = 24.6 bits (51), Expect = 9.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 133 HFQSLVILTMFFLHFR 180
HF SL+++ +F HFR
Sbjct: 198 HFVSLLLIVLFLTHFR 213
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +2
Query: 206 IKPYNSQVFWYDNIFRYYVARKPPSMGNSTPLIILDLSLRRKTTA 340
+K +S+V++Y+++ R V KP + N + L+ + TA
Sbjct: 39 VKTEDSRVYYYNSVTRKSVWEKPEELMNDFEKKLSKLAWKEYATA 83
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 189 LQLTKVQKKHSENNQRLKMLKNIFGHICI 103
LQL QK+ NNQ+ +L +F +C+
Sbjct: 1934 LQLKVDQKEIFSNNQKRAILSYLFRFVCL 1962
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,089,619
Number of Sequences: 5004
Number of extensions: 43732
Number of successful extensions: 154
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 220420454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -