Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_A08
(501 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036798-1|AAH36798.1| 476|Homo sapiens RNA (guanine-7-) methyl... 50 6e-06
AF067791-1|AAC63269.1| 476|Homo sapiens mRNA 5' cap guanine-N-7... 50 6e-06
AB022604-1|BAA74464.1| 476|Homo sapiens mRNA (guanine-7-)methyl... 50 6e-06
AB020966-1|BAA82447.1| 476|Homo sapiens RNA (guanine-N7-) methy... 50 6e-06
AB007858-1|BAA23694.1| 476|Homo sapiens KIAA0398 protein. 50 6e-06
AB022606-1|BAA74462.1| 28|Homo sapiens mRNA (guanine-7-)methyl... 33 0.56
X14608-1|CAA32763.1| 703|Homo sapiens propionyl-CoA carboxylase... 31 2.3
M13572-1|AAA60035.1| 193|Homo sapiens PCCA protein. 31 2.3
BC000140-1|AAH00140.1| 703|Homo sapiens PCCA protein protein. 31 2.3
AY035808-1|AAK61392.1| 703|Homo sapiens propionyl-CoA carboxyla... 31 2.3
AL356575-2|CAH72681.2| 728|Homo sapiens propionyl Coenzyme A ca... 31 2.3
AL355338-5|CAH70370.2| 728|Homo sapiens propionyl Coenzyme A ca... 31 2.3
AL353697-5|CAI40434.2| 728|Homo sapiens propionyl Coenzyme A ca... 31 2.3
AL136526-5|CAI39557.2| 728|Homo sapiens propionyl Coenzyme A ca... 31 2.3
AF385926-1|AAL66189.1| 728|Homo sapiens propionyl-CoA carboxyla... 31 2.3
>BC036798-1|AAH36798.1| 476|Homo sapiens RNA (guanine-7-)
methyltransferase protein.
Length = 476
Score = 49.6 bits (113), Expect = 6e-06
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = -1
Query: 492 ETYPAPNGKTLMGEE-SEYEHAKKYWDSKEYKADQNCIGTMSICEWEVATIYMAFAFKK 319
E YPA L+ E+ +YEHA KY + + + +GT+S EWE +IY+ FAF+K
Sbjct: 419 EPYPANESSKLVSEKVDDYEHAAKYMKNSQVRLP---LGTLSKSEWEATSIYLVFAFEK 474
>AF067791-1|AAC63269.1| 476|Homo sapiens mRNA 5' cap guanine-N-7
methyltransferase protein.
Length = 476
Score = 49.6 bits (113), Expect = 6e-06
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = -1
Query: 492 ETYPAPNGKTLMGEE-SEYEHAKKYWDSKEYKADQNCIGTMSICEWEVATIYMAFAFKK 319
E YPA L+ E+ +YEHA KY + + + +GT+S EWE +IY+ FAF+K
Sbjct: 419 EPYPANESSKLVSEKVDDYEHAAKYMKNSQVRLP---LGTLSKSEWEATSIYLVFAFEK 474
>AB022604-1|BAA74464.1| 476|Homo sapiens mRNA
(guanine-7-)methyltransferase protein.
Length = 476
Score = 49.6 bits (113), Expect = 6e-06
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = -1
Query: 492 ETYPAPNGKTLMGEE-SEYEHAKKYWDSKEYKADQNCIGTMSICEWEVATIYMAFAFKK 319
E YPA L+ E+ +YEHA KY + + + +GT+S EWE +IY+ FAF+K
Sbjct: 419 EPYPANESSKLVSEKVDDYEHAAKYMKNSQVRLP---LGTLSKSEWEATSIYLVFAFEK 474
>AB020966-1|BAA82447.1| 476|Homo sapiens RNA (guanine-N7-)
methyltransferase protein.
Length = 476
Score = 49.6 bits (113), Expect = 6e-06
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = -1
Query: 492 ETYPAPNGKTLMGEE-SEYEHAKKYWDSKEYKADQNCIGTMSICEWEVATIYMAFAFKK 319
E YPA L+ E+ +YEHA KY + + + +GT+S EWE +IY+ FAF+K
Sbjct: 419 EPYPANESSKLVSEKVDDYEHAAKYMKNSQVRLP---LGTLSKSEWEATSIYLVFAFEK 474
>AB007858-1|BAA23694.1| 476|Homo sapiens KIAA0398 protein.
Length = 476
Score = 49.6 bits (113), Expect = 6e-06
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = -1
Query: 492 ETYPAPNGKTLMGEE-SEYEHAKKYWDSKEYKADQNCIGTMSICEWEVATIYMAFAFKK 319
E YPA L+ E+ +YEHA KY + + + +GT+S EWE +IY+ FAF+K
Sbjct: 419 EPYPANESSKLVSEKVDDYEHAAKYMKNSQVRLP---LGTLSKSEWEATSIYLVFAFEK 474
>AB022606-1|BAA74462.1| 28|Homo sapiens mRNA
(guanine-7-)methyltransferase protein.
Length = 28
Score = 33.1 bits (72), Expect = 0.56
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -1
Query: 384 IGTMSICEWEVATIYMAFAFKK 319
+GT+S EWE +IY+ FAF+K
Sbjct: 5 LGTLSKSEWEATSIYLVFAFEK 26
>X14608-1|CAA32763.1| 703|Homo sapiens propionyl-CoA carboxylase
protein.
Length = 703
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -2
Query: 359 GRLLQYTWPLHLRN*NALSGVLMGSQLIQFPKKLISQLVS 240
GRL QY PLHL SG+ GS + + +IS+L++
Sbjct: 390 GRLSQYQEPLHLPGVRVDSGIQPGSDISIYYDPMISKLIT 429
>M13572-1|AAA60035.1| 193|Homo sapiens PCCA protein.
Length = 193
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -2
Query: 359 GRLLQYTWPLHLRN*NALSGVLMGSQLIQFPKKLISQLVS 240
GRL QY PLHL SG+ GS + + +IS+L++
Sbjct: 47 GRLSQYQEPLHLPGVRVDSGIQPGSDISIYYDPMISKLIT 86
>BC000140-1|AAH00140.1| 703|Homo sapiens PCCA protein protein.
Length = 703
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -2
Query: 359 GRLLQYTWPLHLRN*NALSGVLMGSQLIQFPKKLISQLVS 240
GRL QY PLHL SG+ GS + + +IS+L++
Sbjct: 390 GRLSQYQEPLHLPGVRVDSGIQPGSDISIYYDPMISKLIT 429
>AY035808-1|AAK61392.1| 703|Homo sapiens propionyl-CoA carboxylase
alpha polypeptide precursor protein.
Length = 703
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -2
Query: 359 GRLLQYTWPLHLRN*NALSGVLMGSQLIQFPKKLISQLVS 240
GRL QY PLHL SG+ GS + + +IS+L++
Sbjct: 390 GRLSQYQEPLHLPGVRVDSGIQPGSDISIYYDPMISKLIT 429
>AL356575-2|CAH72681.2| 728|Homo sapiens propionyl Coenzyme A
carboxylase, alpha polypeptide protein.
Length = 728
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -2
Query: 359 GRLLQYTWPLHLRN*NALSGVLMGSQLIQFPKKLISQLVS 240
GRL QY PLHL SG+ GS + + +IS+L++
Sbjct: 415 GRLSQYQEPLHLPGVRVDSGIQPGSDISIYYDPMISKLIT 454
>AL355338-5|CAH70370.2| 728|Homo sapiens propionyl Coenzyme A
carboxylase, alpha polypeptide protein.
Length = 728
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -2
Query: 359 GRLLQYTWPLHLRN*NALSGVLMGSQLIQFPKKLISQLVS 240
GRL QY PLHL SG+ GS + + +IS+L++
Sbjct: 415 GRLSQYQEPLHLPGVRVDSGIQPGSDISIYYDPMISKLIT 454
>AL353697-5|CAI40434.2| 728|Homo sapiens propionyl Coenzyme A
carboxylase, alpha polypeptide protein.
Length = 728
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -2
Query: 359 GRLLQYTWPLHLRN*NALSGVLMGSQLIQFPKKLISQLVS 240
GRL QY PLHL SG+ GS + + +IS+L++
Sbjct: 415 GRLSQYQEPLHLPGVRVDSGIQPGSDISIYYDPMISKLIT 454
>AL136526-5|CAI39557.2| 728|Homo sapiens propionyl Coenzyme A
carboxylase, alpha polypeptide protein.
Length = 728
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -2
Query: 359 GRLLQYTWPLHLRN*NALSGVLMGSQLIQFPKKLISQLVS 240
GRL QY PLHL SG+ GS + + +IS+L++
Sbjct: 415 GRLSQYQEPLHLPGVRVDSGIQPGSDISIYYDPMISKLIT 454
>AF385926-1|AAL66189.1| 728|Homo sapiens propionyl-CoA carboxylase
alpha subunit protein.
Length = 728
Score = 31.1 bits (67), Expect = 2.3
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -2
Query: 359 GRLLQYTWPLHLRN*NALSGVLMGSQLIQFPKKLISQLVS 240
GRL QY PLHL SG+ GS + + +IS+L++
Sbjct: 415 GRLSQYQEPLHLPGVRVDSGIQPGSDISIYYDPMISKLIT 454
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,197,372
Number of Sequences: 237096
Number of extensions: 1258209
Number of successful extensions: 2534
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2534
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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