Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_A05
         (650 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U94190-1|AAC15791.1| 1663|Homo sapiens Duo protein.                    30   6.2  
L02320-1|AAA36541.1|  583|Homo sapiens radixin protein.                30   6.2  
BC047109-1|AAH47109.1|  583|Homo sapiens radixin protein.              30   6.2  
AK131379-1|BAD18530.1|  851|Homo sapiens protein ( Homo sapiens ...    30   6.2  

>U94190-1|AAC15791.1| 1663|Homo sapiens Duo protein.
          Length = 1663

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 17/65 (26%), Positives = 36/65 (55%)
 Frame = -2

Query: 643  TEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPPQVDFNGNIYKFIKTR 464
            TE+A +R+ L++  + ++  +     +I   +L  +H++FG      DF+ NI  F+K  
Sbjct: 1292 TEKAYVRD-LHECLETYLWEMTSGVEEIPPGILNKEHIIFGNIQEIYDFHNNI--FLKEL 1348

Query: 463  VQWDQ 449
             +++Q
Sbjct: 1349 EKYEQ 1353


>L02320-1|AAA36541.1|  583|Homo sapiens radixin protein.
          Length = 583

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -2

Query: 637 EAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQ 515
           + +L  +L + T K  L LEEA  K E+   +WQH  F  Q
Sbjct: 414 QEQLAAELAEFTAKIAL-LEEAKKKKEEEATEWQHKAFAAQ 453


>BC047109-1|AAH47109.1|  583|Homo sapiens radixin protein.
          Length = 583

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -2

Query: 637 EAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQ 515
           + +L  +L + T K  L LEEA  K E+   +WQH  F  Q
Sbjct: 414 QEQLAAELAEFTAKIAL-LEEAKKKKEEEATEWQHKAFAAQ 453


>AK131379-1|BAD18530.1|  851|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16443 fis, clone BRAMY3004800, highly  similar
           to Huntingtin-associated protein-interacting protein. ).
          Length = 851

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 17/65 (26%), Positives = 36/65 (55%)
 Frame = -2

Query: 643 TEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPPQVDFNGNIYKFIKTR 464
           TE+A +R+ L++  + ++  +     +I   +L  +H++FG      DF+ NI  F+K  
Sbjct: 638 TEKAYVRD-LHECLETYLWEMTSGVEEIPPGILNKEHIIFGNIQEIYDFHNNI--FLKEL 694

Query: 463 VQWDQ 449
            +++Q
Sbjct: 695 EKYEQ 699


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,802,374
Number of Sequences: 237096
Number of extensions: 1756734
Number of successful extensions: 2814
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2814
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)