Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_P21
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    27   0.21 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.37 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    25   0.49 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -3

Query: 376 SSTSNTKGSADSIISRPSRWPTTCMTVTAPYVMAIQYMEPSSTPPAINGHI 224
           +STSN   S+ S+++  S  PTT     A Y   + +   +S PP  N H+
Sbjct: 89  TSTSNPTYSSRSVMTSCSSVPTT-----ASYGSDLYFPGATSQPPTDNSHV 134


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = -3

Query: 370  TSNTKGSADSIISRPS--RWPTTCMTVTAPYVMAIQYMEPS 254
            T+ T+ +  S  +RP+   WPT   T+  P V+  +  +PS
Sbjct: 1060 TTTTRPTTTSTTTRPTTTNWPTQGTTIPPPAVVMPEVDKPS 1100



 Score = 22.2 bits (45), Expect = 4.6
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +2

Query: 290  SGHCHAGSWPSRRSRDDGVG-GPLGVTRATAHDPSDP 397
            S  C  GS+P  RS + G+G  P   +R     P +P
Sbjct: 973  SNRCCGGSFPLLRSLNRGLGLIPDNPSREDCTKPPEP 1009


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +3

Query: 102 QRGNITRKVLCPQCKAEYIVVFPSMGAFVAMLDAMEEITHKIC 230
           QR N  +K+L  + +    V FP    F+A+LD +  + +++C
Sbjct: 183 QRVNHVKKILEKETQT---VAFPKDNHFLALLDIVHGVHNELC 222


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = +1

Query: 475 WLIFCLSETWTMIAL*WPVRRHHRTQTRAIY 567
           WL++ LS+TW  + + W  +     +T  ++
Sbjct: 467 WLLWLLSQTWITLHI-WTPKCERLARTEKLF 496


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = +1

Query: 475 WLIFCLSETWTMIAL*WPVRRHHRTQTRAIY 567
           WL++ LS+TW  + + W  +     +T  ++
Sbjct: 467 WLLWLLSQTWITLHI-WTPKCERLARTEKLF 496


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = +1

Query: 475 WLIFCLSETWTMIAL*WPVRRHHRTQTRAIY 567
           WL++ LS+TW  + + W  +     +T  ++
Sbjct: 467 WLLWLLSQTWITLHI-WTPKCERLARTEKLF 496


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = +1

Query: 475 WLIFCLSETWTMIAL*WPVRRHHRTQTRAIY 567
           WL++ LS+TW  + + W  +     +T  ++
Sbjct: 467 WLLWLLSQTWITLHI-WTPKCERLARTEKLF 496


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,005
Number of Sequences: 336
Number of extensions: 4503
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)