Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_P21
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    27   0.25 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   4.0  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   5.3  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   5.3  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    22   7.1  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    22   7.1  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    22   7.1  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   7.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.3  

>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
 Frame = +2

Query: 476 GLY--SAFRKRGQ*SRYSGRSDDTTEPKREPSIPDKDILFGSVATNDIDDHRKDILPLDT 649
           G+Y  SA  K+G  +R SG       PK  P   D+D+  G   T      R D LPL  
Sbjct: 585 GVYTCSARNKQGHSARRSGDVAVIVPPKISPFTADRDLHLGERTTLTCSVTRGD-LPLSI 643

Query: 650 EQPSQNNARG 679
                  A G
Sbjct: 644 SWLKDGRAMG 653


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 500 VSERQNISQDRYLSAVLPE 444
           V E Q+  Q+R L +VLPE
Sbjct: 225 VIEEQSTEQERLLLSVLPE 243


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 485 NISQDRYLSAVLPEEQENGIL 423
           N+S+D Y    +PE Q++  L
Sbjct: 554 NVSEDAYRYLCMPENQDSQFL 574


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 485 NISQDRYLSAVLPEEQENGIL 423
           N+S+D Y    +PE Q++  L
Sbjct: 554 NVSEDAYRYLCMPENQDSQFL 574


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 618 SSISLVATEPNRISLSGIDGSRLGSVVSSDRPL 520
           ++I LVA  P+    S  D   +  ++ SDR L
Sbjct: 12  AAIVLVAARPDESYTSKFDNINVDEILHSDRLL 44


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 618 SSISLVATEPNRISLSGIDGSRLGSVVSSDRPL 520
           ++I LVA  P+    S  D   +  ++ SDR L
Sbjct: 12  AAIVLVAARPDESYTSKFDNINVDEILHSDRLL 44


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 618 SSISLVATEPNRISLSGIDGSRLGSVVSSDRPL 520
           ++I LVA  P+    S  D   +  ++ SDR L
Sbjct: 12  AAIVLVAARPDESYTSKFDNINVDEILHSDRLL 44


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -3

Query: 394 VTGIVGSSTSNTKGSADSIISRPSRWPTTCMT 299
           V  +   S +  + S +S    P+R P TC T
Sbjct: 171 VVNLKSGSNTIERNSHESXFVVPTRVPATCCT 202


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 412  CITGRIPFSCSSGSTAL 462
            C T R   SC+SG TA+
Sbjct: 1702 CFTMRPVVSCASGCTAV 1718


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,918
Number of Sequences: 438
Number of extensions: 5549
Number of successful extensions: 27
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)