Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_P20
(740 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132948-28|CAD31828.1| 263|Caenorhabditis elegans Hypothetical... 109 2e-24
Z92972-2|CAB07487.1| 336|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical p... 31 1.1
Z14092-5|CAD45600.1| 816|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z14092-4|CAD45599.1| 820|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z14092-3|CAA78473.3| 754|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL021566-4|CAA16505.1| 336|Caenorhabditis elegans Hypothetical ... 31 1.1
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL590342-2|CAC35859.3| 685|Caenorhabditis elegans Hypothetical ... 29 4.6
AL032622-4|CAA21499.1| 738|Caenorhabditis elegans Y66A7A.5 prot... 29 4.6
AC024882-15|AAF60936.1| 688|Caenorhabditis elegans Hypothetical... 29 4.6
Z99281-35|CAB16518.2| 524|Caenorhabditis elegans Hypothetical p... 28 8.0
>AL132948-28|CAD31828.1| 263|Caenorhabditis elegans Hypothetical
protein Y39B6A.36 protein.
Length = 263
Score = 109 bits (262), Expect = 2e-24
Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 7/203 (3%)
Frame = +3
Query: 153 ELDLSNTGRGVWLVKVPKYIANKWEKAPGNIEVGKLKI-SRVPGTRAKVQLS------LS 311
++D R +WLVKVP+Y++ W+ GN+ VGKL+I ++V AK +
Sbjct: 10 DVDCELAKRSIWLVKVPRYLSELWDANEGNV-VGKLQIGAQVELHTAKGLIHPKPKEPTE 68
Query: 312 EAVLCLKDPGEQSIPKEHKLDVSNVNTQSLGVFSHIAPTNTDSVVPETENLYMEGRIVQK 491
+ + P IP E+ + +V +Q++ V S +T L +EGRI++K
Sbjct: 69 GSSSTVTQPEASEIPTEYSFILHDVKSQTMSVLSEDKQGLGADAPIKTGKLAIEGRIIKK 128
Query: 492 LECRPNDDVTYYKLKSESIKKASMPQRQVQQLDRIVQNFKPVSDHPHNIDYQERKKAEGK 671
ECRP Y K+K I K + P++ V+ +++ FKPVS H ++ ++KK K
Sbjct: 129 AECRPPATSKYMKMKLAHIVKNTQPKKTVKMIEKAAVKFKPVSVHAEDMIKSKQKKDGAK 188
Query: 672 KARDDKEAVLNMLFAAFEKHXYY 740
R D++ + LF AFEKH +Y
Sbjct: 189 TYRADRDVLRGALFKAFEKHSFY 211
>Z92972-2|CAB07487.1| 336|Caenorhabditis elegans Hypothetical
protein T19C9.2 protein.
Length = 336
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -2
Query: 292 LALVP-GTLEIFSFPTSMFPGAFSHLFAIY 206
LA+ P T E F FP +F G SH+F +Y
Sbjct: 183 LAIYPCPTREFFIFPVCVFEGTTSHIFLVY 212
>Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical
protein R107.4d protein.
Length = 817
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +3
Query: 423 PTNTDSVVPETENLYMEGRIVQKLECRPNDDVTYYKLKSESIKKASMPQRQVQQLDRIVQ 602
P + VVP+T ++ M + + +E DD+T KL IKK + ++D +
Sbjct: 408 PDDLYLVVPQTSHVDMRKILARNIEFHEFDDMTDRKLSEIRIKKCYEGLSMLTEIDEYLA 467
Query: 603 NFKPVS 620
F VS
Sbjct: 468 LFDRVS 473
>Z14092-5|CAD45600.1| 816|Caenorhabditis elegans Hypothetical
protein R107.4c protein.
Length = 816
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +3
Query: 423 PTNTDSVVPETENLYMEGRIVQKLECRPNDDVTYYKLKSESIKKASMPQRQVQQLDRIVQ 602
P + VVP+T ++ M + + +E DD+T KL IKK + ++D +
Sbjct: 408 PDDLYLVVPQTSHVDMRKILARNIEFHEFDDMTDRKLSEIRIKKCYEGLSMLTEIDEYLA 467
Query: 603 NFKPVS 620
F VS
Sbjct: 468 LFDRVS 473
>Z14092-4|CAD45599.1| 820|Caenorhabditis elegans Hypothetical
protein R107.4b protein.
Length = 820
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +3
Query: 423 PTNTDSVVPETENLYMEGRIVQKLECRPNDDVTYYKLKSESIKKASMPQRQVQQLDRIVQ 602
P + VVP+T ++ M + + +E DD+T KL IKK + ++D +
Sbjct: 408 PDDLYLVVPQTSHVDMRKILARNIEFHEFDDMTDRKLSEIRIKKCYEGLSMLTEIDEYLA 467
Query: 603 NFKPVS 620
F VS
Sbjct: 468 LFDRVS 473
>Z14092-3|CAA78473.3| 754|Caenorhabditis elegans Hypothetical
protein R107.4a protein.
Length = 754
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +3
Query: 423 PTNTDSVVPETENLYMEGRIVQKLECRPNDDVTYYKLKSESIKKASMPQRQVQQLDRIVQ 602
P + VVP+T ++ M + + +E DD+T KL IKK + ++D +
Sbjct: 408 PDDLYLVVPQTSHVDMRKILARNIEFHEFDDMTDRKLSEIRIKKCYEGLSMLTEIDEYLA 467
Query: 603 NFKPVS 620
F VS
Sbjct: 468 LFDRVS 473
>AL021566-4|CAA16505.1| 336|Caenorhabditis elegans Hypothetical
protein F08E10.6 protein.
Length = 336
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -2
Query: 292 LALVP-GTLEIFSFPTSMFPGAFSHLFAIY 206
LA+ P T E F FP +F G SH+F +Y
Sbjct: 183 LAIYPCPTREFFIFPVCVFEGTTSHIFLVY 212
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
protein T13H2.5a protein.
Length = 2471
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 234 PGNIEVGKLKISRVPGTRAKVQLSLSEAVLCLKDPGEQS--IPKEHKLDVSNVNTQSLGV 407
PG+ + + K+ R PGT EA LC+ G++ IP E ++S+ T +L
Sbjct: 665 PGDTGISRPKVQRAPGTNRLSMNVCPEAGLCVLKEGKKKLVIPPE-DYEISSDETVTLSD 723
Query: 408 FSHIAPT 428
+P+
Sbjct: 724 SEETSPS 730
>AL590342-2|CAC35859.3| 685|Caenorhabditis elegans Hypothetical
protein Y66A7A.5 protein.
Length = 685
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 534 KSESIKKASMPQRQVQQLDRIVQNFKPVSDHP 629
+SE +S P++ VQQ DR+++N + HP
Sbjct: 288 ESEQPSTSSAPRKLVQQRDRLLENLYQSNRHP 319
>AL032622-4|CAA21499.1| 738|Caenorhabditis elegans Y66A7A.5
protein.
Length = 738
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 534 KSESIKKASMPQRQVQQLDRIVQNFKPVSDHP 629
+SE +S P++ VQQ DR+++N + HP
Sbjct: 288 ESEQPSTSSAPRKLVQQRDRLLENLYQSNRHP 319
>AC024882-15|AAF60936.1| 688|Caenorhabditis elegans Hypothetical
protein Y9C9A.13 protein.
Length = 688
Score = 28.7 bits (61), Expect = 4.6
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +3
Query: 135 YSTTMTELDL--SNTGRGVWLVKVPKYIANKWEKAPGNIEVGKLKISRVPGTRAKVQLSL 308
Y+ T LDL SN L K + + K N + K+ + V T ++L L
Sbjct: 23 YNDFETHLDLQSSNIIFASLLSKRSSEVVKFFPKISKNFFLTKVNLKNVRLTHPMIKL-L 81
Query: 309 SEAVLCLKDPGEQSIPKEHKLDVSNVN 389
SE L G+Q+I K++K D++ V+
Sbjct: 82 SEHTLESLALGDQAIRKDYKNDIAQVD 108
>Z99281-35|CAB16518.2| 524|Caenorhabditis elegans Hypothetical
protein Y57G11C.17 protein.
Length = 524
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -2
Query: 286 LVPGTLEIFSFPTSMFP--GAFSHLFAIYLGTFTNHTPL 176
+V G L++FS S+FP F+ L + LG F N+ L
Sbjct: 474 VVQGVLDVFSINISIFPLTAGFAFLHILTLGYFFNNVCL 512
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,550,950
Number of Sequences: 27780
Number of extensions: 350055
Number of successful extensions: 1055
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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