Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_P19
(477 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|R... 177 1e-43
UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110... 159 2e-38
UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4; Eukar... 156 3e-37
UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68; Euka... 148 7e-35
UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4; ... 145 5e-34
UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia ob... 127 1e-28
UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S riboso... 122 3e-27
UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=... 119 4e-26
UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing prote... 116 4e-25
UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkie... 115 5e-25
UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n... 113 3e-24
UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S riboso... 109 3e-23
UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6; T... 109 3e-23
UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillar... 103 2e-21
UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2; ... 103 2e-21
UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2; Apanspo... 98 1e-19
UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiell... 81 2e-14
UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin re... 67 2e-10
UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2; Thermoprot... 60 2e-08
UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n... 56 5e-07
UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10; Thermoprot... 54 2e-06
UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5; Crenar... 54 2e-06
UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 48 1e-04
UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1; Meth... 37 0.27
UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011; ... 32 5.7
UniRef50_A7P6R9 Cluster: Chromosome chr9 scaffold_7, whole genom... 32 5.7
UniRef50_Q7RHF5 Cluster: Putative uncharacterized protein PY0403... 31 10.0
UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:... 31 10.0
>UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|Rep:
Ribosomal protein S26 - Pectinaria gouldii (Trumpet
worm) (Ice-cream cone worm)
Length = 109
Score = 177 bits (430), Expect = 1e-43
Identities = 82/109 (75%), Positives = 92/109 (84%)
Frame = +2
Query: 23 MTRKRRNGGRAKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 202
MT+KRRN GR+K GRGH + V CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASVY
Sbjct: 1 MTKKRRNNGRSKKGRGHTRPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVYE 60
Query: 203 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRP 349
+ LPKLYAKLHYCVSCAIHSKVVRNRS++ R+ RTPP P M +P
Sbjct: 61 GYPLPKLYAKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFKPGAMRKP 109
>UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110;
Fungi/Metazoa group|Rep: 40S ribosomal protein S26-like
1 - Homo sapiens (Human)
Length = 115
Score = 159 bits (387), Expect = 2e-38
Identities = 72/98 (73%), Positives = 82/98 (83%)
Frame = +2
Query: 23 MTRKRRNGGRAKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 202
MT+KRRN AK GRGHV+ + CTNC RCVP DKAIKKFVIRNIVEAAAVRDI++ SV+
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFD 60
Query: 203 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 316
+ LPKLY KLHYCVSCAIHSKVVRNRS++ + RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPP 98
>UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4;
Eukaryota|Rep: 40S ribosomal protein S26-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 156 bits (378), Expect = 3e-37
Identities = 70/113 (61%), Positives = 84/113 (74%)
Frame = +2
Query: 23 MTRKRRNGGRAKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 202
MT KRRNGGR KH RGHV + C+NC +C PKDKAIK+F++RNIVE AA+RD+ +ASVY
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 203 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQ 361
+ LPKLYAK YCVSCAIHS VVR RS+ +RR+RTPP R P+ Q
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPGQ 113
>UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68;
Eukaryota|Rep: 40S ribosomal protein S26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 119
Score = 148 bits (358), Expect = 7e-35
Identities = 64/99 (64%), Positives = 81/99 (81%)
Frame = +2
Query: 23 MTRKRRNGGRAKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 202
M +KR + GR K GRGHVK V C NC++ +PKDKAIK+ IRNIVEAAAVRD+++ASVYP
Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYP 60
Query: 203 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK 319
+ LPK Y KLHYCVSCAIH+++VR RS++DR+ R PP+
Sbjct: 61 EYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQ 99
>UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S26 - Entamoeba histolytica HM-1:IMSS
Length = 147
Score = 145 bits (351), Expect = 5e-34
Identities = 68/113 (60%), Positives = 84/113 (74%)
Frame = +2
Query: 23 MTRKRRNGGRAKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 202
MT KRRN GR+K GRGH + V C++C RCVPKDKAIK++ I+NIVEAAAVRDI+D S
Sbjct: 1 MTSKRRNNGRSKKGRGHTQNVRCSHCGRCVPKDKAIKRYQIKNIVEAAAVRDISDNSALT 60
Query: 203 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQ 361
++LPK Y KL YCVSC IH +VVR RS+ DRR R PPK + ++ QAV+
Sbjct: 61 KYKLPKTYMKLEYCVSCGIHGRVVRVRSRTDRRNRLPPK-RVVKKTNKQQAVK 112
>UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia
obliqua|Rep: Ribosomal protein S26e - Lonomia obliqua
(Moth)
Length = 82
Score = 127 bits (306), Expect = 1e-28
Identities = 57/71 (80%), Positives = 64/71 (90%)
Frame = +2
Query: 152 IVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFP 331
+++ +RDIN+ASVY FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK+ FP
Sbjct: 11 LLKLLPLRDINEASVYTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKNTFP 70
Query: 332 RDMSRPQAVQR 364
RDM+RPQ VQR
Sbjct: 71 RDMARPQNVQR 81
>UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S ribosomal
protein S26-2, partial; n=4; Pan troglodytes|Rep:
PREDICTED: similar to 40S ribosomal protein S26-2,
partial - Pan troglodytes
Length = 196
Score = 122 bits (295), Expect = 3e-27
Identities = 61/107 (57%), Positives = 75/107 (70%), Gaps = 2/107 (1%)
Frame = +2
Query: 38 RNGGRAKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLP 217
RN RAK G H++ + CTN A+ VPKDKAIKKF+IRN+VEAAAVRDI++ASV+ + LP
Sbjct: 1 RNNNRAKKGHSHMQRIRCTNYAQRVPKDKAIKKFIIRNVVEAAAVRDISEASVFNAYVLP 60
Query: 218 K--LYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQ 352
K LY KL+YCV CAIH KVVRN K + +T P P + PQ
Sbjct: 61 KLYLYVKLNYCVRCAIHGKVVRNPPCKAHKDQTHPPRFRPSRSAAPQ 107
>UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=1;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S26,
putative - Trichomonas vaginalis G3
Length = 118
Score = 119 bits (286), Expect = 4e-26
Identities = 52/97 (53%), Positives = 69/97 (71%)
Frame = +2
Query: 23 MTRKRRNGGRAKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 202
M KRRN GR+K RGH + V C NC R VPKDKAI +F I+N+V+A++ +D++DA +Y
Sbjct: 1 MPVKRRNHGRSKMNRGHTRTVNCMNCGRQVPKDKAITRFAIKNMVDASSAKDVSDACIYQ 60
Query: 203 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 313
++LPK Y K +YCVSCA+H VVR R+ RR R P
Sbjct: 61 GYELPKTYQKQYYCVSCAVHRHVVRPRNVNVRRNRVP 97
>UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing protein;
n=12; Alveolata|Rep: Ribosomal protein S26e containing
protein - Tetrahymena thermophila SB210
Length = 197
Score = 116 bits (278), Expect = 4e-25
Identities = 53/103 (51%), Positives = 71/103 (68%), Gaps = 2/103 (1%)
Frame = +2
Query: 23 MTRKRRNGGRAKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 202
M KRRN GR++ RGH + V CTNC R V KDKA+K++ +R++V+ ++ RDI +
Sbjct: 79 MPVKRRNAGRSQKNRGHTRTVPCTNCGRQVAKDKAVKRYTVRDMVDPSSKRDIQQKLAFE 138
Query: 203 MFQ--LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSN 325
+ +PKLY KL YC+SCAIHS+VVR R +DRRIR PP N
Sbjct: 139 NEKQGIPKLYVKLQYCISCAIHSRVVRVRCAEDRRIRRPPIRN 181
>UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkiella
nova|Rep: 40S ribosomal protein S26 - Oxytricha nova
Length = 125
Score = 115 bits (277), Expect = 5e-25
Identities = 59/113 (52%), Positives = 73/113 (64%), Gaps = 2/113 (1%)
Frame = +2
Query: 23 MTRKRRNGGRAKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 202
M KRRN GR K +GH V CTNC R V KDKAIK+F RN+V+A++ RDI + Y
Sbjct: 1 MPSKRRNNGRNKKNKGHADTVRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYA 60
Query: 203 M--FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQA 355
F +PK+Y KL YCVSCAIH+++VR RS +DRR R K R RP+A
Sbjct: 61 QSDFTMPKIYVKLSYCVSCAIHARIVRVRSVEDRRHRYTTKL---RQHVRPEA 110
>UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n=2;
Rattus norvegicus|Rep: UPI00001CB188 UniRef100 entry -
Rattus norvegicus
Length = 107
Score = 113 bits (271), Expect = 3e-24
Identities = 55/87 (63%), Positives = 66/87 (75%)
Frame = +2
Query: 53 AKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 232
AK G GHV+ V C + A C+PKDKAIK F+I+NI+EAAAVRDI+ A+V+ + LP LY K
Sbjct: 12 AKKGCGHVQPVPCRSSAWCLPKDKAIK-FIIQNILEAAAVRDIDKANVFKAYMLPMLYVK 70
Query: 233 LHYCVSCAIHSKVVRNRSKKDRRIRTP 313
LHYCVSCAIHS+VVRN K RR P
Sbjct: 71 LHYCVSCAIHSEVVRNHLLKLRRTEHP 97
>UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S ribosomal
protein S26 isoform 3; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 40S ribosomal protein S26 isoform
3 - Canis familiaris
Length = 118
Score = 109 bits (262), Expect = 3e-23
Identities = 49/59 (83%), Positives = 55/59 (93%)
Frame = +2
Query: 23 MTRKRRNGGRAKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVY 199
MT+KRRN GRAK GRGHV+ + CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVF 59
>UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein s26, putative -
Leishmania major
Length = 112
Score = 109 bits (262), Expect = 3e-23
Identities = 54/106 (50%), Positives = 72/106 (67%), Gaps = 4/106 (3%)
Frame = +2
Query: 23 MTRKRRNGGRAK--HGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDAS- 193
MT KRRN GR+K H RG VK + C NC R PKDKA+ +FV+R +++AA+ RD+ +AS
Sbjct: 1 MTTKRRNHGRSKPAHSRGRVKPIHCFNCGRLTPKDKAVGRFVVRRMLDAASARDVAEASP 60
Query: 194 VY-PMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNF 328
VY F +PKLY K +C++CAIHS+ VR R +R+IR K F
Sbjct: 61 VYGANFPMPKLYMKQRFCIACAIHSRTVRARPVGNRKIRYTKKVPF 106
>UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillardia
theta|Rep: 40S ribosomal protein S26 - Guillardia theta
(Cryptomonas phi)
Length = 98
Score = 103 bits (248), Expect = 2e-21
Identities = 45/95 (47%), Positives = 68/95 (71%)
Frame = +2
Query: 23 MTRKRRNGGRAKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 202
MT+KRRN GR+K RG V+ + C + VPKDKAI ++VI+NIV+ +++RD+ D+ +Y
Sbjct: 1 MTKKRRNNGRSKKNRGLVRRIHCNLTGKLVPKDKAIVRYVIKNIVDLSSLRDLQDSCIYE 60
Query: 203 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIR 307
+ +PKLY K + + AIH+++VR RSK DR+ R
Sbjct: 61 YYTMPKLYYKNTFSIESAIHNRIVRVRSKADRKKR 95
>UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2;
Ostreococcus|Rep: Ribosomal protein S26, cytosolic -
Ostreococcus tauri
Length = 221
Score = 103 bits (248), Expect = 2e-21
Identities = 45/82 (54%), Positives = 63/82 (76%)
Frame = +2
Query: 74 VKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 253
VK V C + VPKDKA+++F++RNIVE+AA+RD+ ++ + + LPKLY K++Y +S
Sbjct: 127 VKRVFCESSGALVPKDKAVRRFMVRNIVESAAIRDLQESCAFESYTLPKLYRKVYYSISA 186
Query: 254 AIHSKVVRNRSKKDRRIRTPPK 319
AIHSKVVR RS++ RRIR PPK
Sbjct: 187 AIHSKVVRVRSREARRIRDPPK 208
>UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2;
Apansporoblastina|Rep: 40S RIBOSOMAL PROTEIN S26 -
Encephalitozoon cuniculi
Length = 105
Score = 97.9 bits (233), Expect = 1e-19
Identities = 41/91 (45%), Positives = 62/91 (68%)
Frame = +2
Query: 35 RRNGGRAKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQL 214
RRN GR K RG ++ C C PKDKAIK+F I++++E A+ D+ A++Y +F++
Sbjct: 2 RRNHGRGKKNRGSAGSIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEV 61
Query: 215 PKLYAKLHYCVSCAIHSKVVRNRSKKDRRIR 307
P++ K +CVSCA H+K+VR RS + R+IR
Sbjct: 62 PRMGYKSQFCVSCACHAKIVRVRSSQARKIR 92
>UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiella
natans|Rep: Ribosomal protein S26 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 98
Score = 80.6 bits (190), Expect = 2e-14
Identities = 37/94 (39%), Positives = 57/94 (60%)
Frame = +2
Query: 23 MTRKRRNGGRAKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 202
M +KRRN GR+K+ RGHV + C + VP+DKAIKK ++++ ++D + V P
Sbjct: 1 MVKKRRNNGRSKNNRGHVNRIHCMSSNALVPRDKAIKKLNVKSLFFPNILKDTPNVFVLP 60
Query: 203 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRI 304
++ PKLY+ + Y +S A K ++ KK RRI
Sbjct: 61 GYKAPKLYSYVFYSISSAFSQKFIKPGRKKYRRI 94
>UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin
repeat domain protein 11 (Ankyrin repeat-containing
cofactor 1); n=1; Rattus norvegicus|Rep: PREDICTED:
similar to Ankyrin repeat domain protein 11 (Ankyrin
repeat-containing cofactor 1) - Rattus norvegicus
Length = 682
Score = 67.3 bits (157), Expect = 2e-10
Identities = 33/57 (57%), Positives = 40/57 (70%)
Frame = +2
Query: 65 RGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKL 235
R +V+ + NC + +PKDKA KKFV RNIVEAAAVRDI +A+V LPK Y KL
Sbjct: 34 RSYVRPIGYMNCVQYMPKDKASKKFVTRNIVEAAAVRDIAEANVLDANVLPKFYIKL 90
>UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2;
Thermoprotei|Rep: Ribosomal protein S26E - Caldivirga
maquilingensis IC-167
Length = 152
Score = 60.5 bits (140), Expect = 2e-08
Identities = 31/108 (28%), Positives = 55/108 (50%)
Frame = +2
Query: 29 RKRRNGGRAKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 208
+KR+N GR K +G V C NC + +P+ KA++ V + + +++
Sbjct: 7 KKRKNRGRHKGDKGKESIVYCDNCGKMIPRSKAVRVTVPYSPIPTDLAKELEKQGAI--- 63
Query: 209 QLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQ 352
+P+ Y YCV+CAI+ +++ RS+ +R+ + P R RPQ
Sbjct: 64 -VPRYYITKTYCVNCAIYLGIIKVRSEDERKSKKP----ILRGQQRPQ 106
>UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC1C52 UniRef100 entry -
Rattus norvegicus
Length = 70
Score = 55.6 bits (128), Expect = 5e-07
Identities = 41/86 (47%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Frame = +2
Query: 29 RKRRNGGRAKHGRGH-----VKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDAS 193
R RR+ G+ K GR VKA N C+ KDKA KFVI+NIVEAAA+R
Sbjct: 3 RMRRDEGKGKKGRSQGLLWPVKAAA--NFTGCMTKDKA-NKFVIQNIVEAAAIR------ 53
Query: 194 VYPMFQLPKLYAKLHYCVSCAIHSKV 271
Y KLH CVSCAIH KV
Sbjct: 54 ---------FYVKLHCCVSCAIHIKV 70
>UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10;
Thermoprotei|Rep: Ribosomal protein S26 - Pyrobaculum
aerophilum
Length = 98
Score = 54.0 bits (124), Expect = 2e-06
Identities = 25/97 (25%), Positives = 50/97 (51%)
Frame = +2
Query: 23 MTRKRRNGGRAKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 202
M +KR+N GR K +G + C NC + +P+ KA++ V + V R++
Sbjct: 1 MPKKRKNRGRKKGDKGREPYLHCDNCGKIMPRSKAVRVTVPYSPVPPDLARELEKQGAI- 59
Query: 203 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 313
+ + YC++CA+ +++ RS+++R+ + P
Sbjct: 60 ---ISRYLVTKTYCINCAVFFGIIKVRSREERKKKIP 93
>UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5;
Crenarchaeota|Rep: 30S ribosomal protein S26e -
Aeropyrum pernix
Length = 95
Score = 54.0 bits (124), Expect = 2e-06
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +2
Query: 23 MTRKRRNGGRAKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI-NDASVY 199
M +KR + GR K +G V C NC R VP DKAI + + V+ ++ ++
Sbjct: 1 MPKKRESRGRRKGAKGKAGTVQCDNCGRVVPADKAICVTRMYSPVDPQLAEELEKKGAII 60
Query: 200 PMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRR 301
+ + K YCVSCA+H +V+ R ++ R+
Sbjct: 61 MRYPVTKC-----YCVSCAVHYGIVKIRPEEQRK 89
>UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 157
Score = 47.6 bits (108), Expect = 1e-04
Identities = 33/100 (33%), Positives = 48/100 (48%)
Frame = -3
Query: 322 TLGRSTDSSVFLRSVPDNFAVDGA*HAXXXXXXXXXXXEHWVYRGIVNISDRRRFYDVPN 143
+L RS+DSSV S +N +VD A + V RG ISD F DV +
Sbjct: 30 SLWRSSDSSVSSGSDSNNSSVDSARNTVVQLVVGLWKSIFSVDRGFRQISDSSSFNDVSD 89
Query: 142 HELFDGLVLWHAPRAVCAXHGFNVTTSMLGASSITALTSH 23
DGLVLW+ V +VT+++L ++ ++L H
Sbjct: 90 SHSLDGLVLWNRSGTVDTSDRLDVTSTLLVSTVGSSLLWH 129
>UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1;
Methanopyrus kandleri|Rep: Zn-ribbon containing protein
- Methanopyrus kandleri
Length = 87
Score = 36.7 bits (81), Expect = 0.27
Identities = 24/80 (30%), Positives = 35/80 (43%)
Frame = +2
Query: 17 RNMTRKRRNGGRAKHGRGHVKAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASV 196
RN RK R+G + RG V C C VP+ KAI I + + ++D V
Sbjct: 3 RNPRRKGRDGWKQSKSRGKPSFVTCECCGGKVPRHKAIPWTQGFRITDPVVRQAVDDRYV 62
Query: 197 YPMFQLPKLYAKLHYCVSCA 256
+ + K++YC CA
Sbjct: 63 HTFSR------KVYYCPKCA 76
>UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 53.t00011 - Entamoeba histolytica HM-1:IMSS
Length = 586
Score = 32.3 bits (70), Expect = 5.7
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +2
Query: 95 NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 232
N ++C+PKDK++ ++V N ++ +RDI +VY + + KL K
Sbjct: 173 NESKCIPKDKSLNEYVENNPIK-FTIRDI--VTVYSISDIKKLMMK 215
>UniRef50_A7P6R9 Cluster: Chromosome chr9 scaffold_7, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr9 scaffold_7, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 858
Score = 32.3 bits (70), Expect = 5.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 199 VYRGIVNISDRRRFYDVPNHELFDGLVLWHAPRAVCAXHGF 77
VY G +SD +R ++V E F L+LW++ HG+
Sbjct: 75 VYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGY 115
>UniRef50_Q7RHF5 Cluster: Putative uncharacterized protein PY04032;
n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY04032 - Plasmodium yoelii yoelii
Length = 1508
Score = 31.5 bits (68), Expect = 10.0
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = +2
Query: 110 VPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAI-HSKVVRNRS 286
V K + +K I+ I+ A+ +IND + MF + + CV+ I H+ + RN +
Sbjct: 589 VEKKRCEQKLDIKKIINNDALTNINDLEIRKMFDSSEYNTEKINCVTGDICHTTMFRNNN 648
Query: 287 -----KKDRRIRT 310
KKD++I++
Sbjct: 649 SNHEEKKDKKIKS 661
>UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:
NEQ043 - Nanoarchaeum equitans
Length = 84
Score = 31.5 bits (68), Expect = 10.0
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +2
Query: 77 KAVXCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCA 256
K V C C R +PK+KA + N+ ++++ V +F + K++ C SCA
Sbjct: 11 KTVRCYYCGRILPKEKAYVIYTKPNV-----AGELSENEVIAVFSQKR---KIYVCPSCA 62
Query: 257 IHSKVVRNRSK 289
H + +R +
Sbjct: 63 RHRGIKDHRKE 73
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 369,247,798
Number of Sequences: 1657284
Number of extensions: 6446110
Number of successful extensions: 16737
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 16248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16723
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -