Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_P18
(719 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC112107-1|AAI12108.1| 501|Homo sapiens tetratricopeptide repea... 86 1e-16
BC105128-1|AAI05129.1| 501|Homo sapiens tetratricopeptide repea... 86 1e-16
BC073796-1|AAH73796.1| 384|Homo sapiens TTC19 protein protein. 86 1e-16
BC011698-1|AAH11698.2| 382|Homo sapiens TTC19 protein protein. 86 1e-16
AK000350-1|BAA91103.1| 273|Homo sapiens protein ( Homo sapiens ... 77 5e-14
BC030146-1|AAH30146.1| 717|Homo sapiens RNA binding motif prote... 33 1.0
AK025571-1|BAB15173.1| 727|Homo sapiens osaminidase mRNA. prot... 33 1.0
>BC112107-1|AAI12108.1| 501|Homo sapiens tetratricopeptide repeat
domain 19 protein.
Length = 501
Score = 86.2 bits (204), Expect = 1e-16
Identities = 47/118 (39%), Positives = 68/118 (57%)
Frame = +3
Query: 366 AEDELIHTIKHCILFIQRYDYIKAEQLLHVALRQAQQMQHQLAITYIYDVMANLALEREH 545
AE E+I +K L I + + +AE +LH ALR A Q ++ AITY YD+MANLA R
Sbjct: 213 AEAEIIQLLKRAKLSIMKDEPEEAELILHDALRLAYQTDNKKAITYTYDLMANLAFIRGQ 272
Query: 546 LDKAKDLFVAVTQRIMADGATEDDFRVVHISTKLARISHLKKDYQTAQMGYEWCLXKL 719
L+ A+ LF A ++ G ++D ++ IS KLA I + + A GYE+C+ L
Sbjct: 273 LENAEQLFKATMSYLLGGGMKQEDNAIIEISLKLASIYAAQNRQEFAVAGYEFCISTL 330
>BC105128-1|AAI05129.1| 501|Homo sapiens tetratricopeptide repeat
domain 19 protein.
Length = 501
Score = 86.2 bits (204), Expect = 1e-16
Identities = 47/118 (39%), Positives = 68/118 (57%)
Frame = +3
Query: 366 AEDELIHTIKHCILFIQRYDYIKAEQLLHVALRQAQQMQHQLAITYIYDVMANLALEREH 545
AE E+I +K L I + + +AE +LH ALR A Q ++ AITY YD+MANLA R
Sbjct: 213 AEAEIIQLLKRAKLSIMKDEPEEAELILHDALRLAYQTDNKKAITYTYDLMANLAFIRGQ 272
Query: 546 LDKAKDLFVAVTQRIMADGATEDDFRVVHISTKLARISHLKKDYQTAQMGYEWCLXKL 719
L+ A+ LF A ++ G ++D ++ IS KLA I + + A GYE+C+ L
Sbjct: 273 LENAEQLFKATMSYLLGGGMKQEDNAIIEISLKLASIYAAQNRQEFAVAGYEFCISTL 330
>BC073796-1|AAH73796.1| 384|Homo sapiens TTC19 protein protein.
Length = 384
Score = 86.2 bits (204), Expect = 1e-16
Identities = 47/118 (39%), Positives = 68/118 (57%)
Frame = +3
Query: 366 AEDELIHTIKHCILFIQRYDYIKAEQLLHVALRQAQQMQHQLAITYIYDVMANLALEREH 545
AE E+I +K L I + + +AE +LH ALR A Q ++ AITY YD+MANLA R
Sbjct: 96 AEAEIIQLLKRAKLSIMKDEPEEAELILHDALRLAYQTDNKKAITYTYDLMANLAFIRGQ 155
Query: 546 LDKAKDLFVAVTQRIMADGATEDDFRVVHISTKLARISHLKKDYQTAQMGYEWCLXKL 719
L+ A+ LF A ++ G ++D ++ IS KLA I + + A GYE+C+ L
Sbjct: 156 LENAEQLFKATMSYLLGGGMKQEDNAIIEISLKLASIYAAQNRQEFAVAGYEFCISTL 213
>BC011698-1|AAH11698.2| 382|Homo sapiens TTC19 protein protein.
Length = 382
Score = 86.2 bits (204), Expect = 1e-16
Identities = 47/118 (39%), Positives = 68/118 (57%)
Frame = +3
Query: 366 AEDELIHTIKHCILFIQRYDYIKAEQLLHVALRQAQQMQHQLAITYIYDVMANLALEREH 545
AE E+I +K L I + + +AE +LH ALR A Q ++ AITY YD+MANLA R
Sbjct: 94 AEAEIIQLLKRAKLSIMKDEPEEAELILHDALRLAYQTDNKKAITYTYDLMANLAFIRGQ 153
Query: 546 LDKAKDLFVAVTQRIMADGATEDDFRVVHISTKLARISHLKKDYQTAQMGYEWCLXKL 719
L+ A+ LF A ++ G ++D ++ IS KLA I + + A GYE+C+ L
Sbjct: 154 LENAEQLFKATMSYLLGGGMKQEDNAIIEISLKLASIYAAQNRQEFAVAGYEFCISTL 211
>AK000350-1|BAA91103.1| 273|Homo sapiens protein ( Homo sapiens
cDNA FLJ20343 fis, clone HEP13649. ).
Length = 273
Score = 77.4 bits (182), Expect = 5e-14
Identities = 40/96 (41%), Positives = 57/96 (59%)
Frame = +3
Query: 432 KAEQLLHVALRQAQQMQHQLAITYIYDVMANLALEREHLDKAKDLFVAVTQRIMADGATE 611
+AE +LH ALR A Q ++ AITY YD+MANLA R L+ A+ LF A ++ G +
Sbjct: 7 EAELILHDALRLAYQTDNKKAITYTYDLMANLAFIRGQLENAEQLFKATMSYLLGGGMKQ 66
Query: 612 DDFRVVHISTKLARISHLKKDYQTAQMGYEWCLXKL 719
+D ++ IS KLA I + + A GYE+C+ L
Sbjct: 67 EDNAIIEISLKLASIYAAQNRQEFAVAGYEFCISTL 102
>BC030146-1|AAH30146.1| 717|Homo sapiens RNA binding motif protein
35B protein.
Length = 717
Score = 33.1 bits (72), Expect = 1.0
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 441 QLLHVALRQAQQMQHQLAITYIYDVMANLALEREHLDKAKDLFVA-VTQRI-MADGATED 614
Q+LH + + + ++ YD+ ++ A+DL VA + Q + + ATED
Sbjct: 138 QVLHPEASRKNLVLPDMFFSF-YDLRREFHMQHPSTCPARDLTVATMAQGLGLETDATED 196
Query: 615 DFRVVHISTKLARISHLKKD 674
DF V + T +A I HL K+
Sbjct: 197 DFGVWEVKTMVAVILHLLKE 216
>AK025571-1|BAB15173.1| 727|Homo sapiens osaminidase mRNA.
protein.
Length = 727
Score = 33.1 bits (72), Expect = 1.0
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 441 QLLHVALRQAQQMQHQLAITYIYDVMANLALEREHLDKAKDLFVA-VTQRI-MADGATED 614
Q+LH + + + ++ YD+ ++ A+DL VA + Q + + ATED
Sbjct: 138 QVLHPEASRKNLVLPDMFFSF-YDLRREFHMQHPSTCPARDLTVATMAQGLGLETDATED 196
Query: 615 DFRVVHISTKLARISHLKKD 674
DF V + T +A I HL K+
Sbjct: 197 DFGVWEVKTMVAVILHLLKE 216
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,415,754
Number of Sequences: 237096
Number of extensions: 1764401
Number of successful extensions: 3347
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3345
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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