Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_P15
         (662 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   6.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.0  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   9.0  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   9.0  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   9.0  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   9.0  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   9.0  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   9.0  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   9.0  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   9.0  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 379 MSSWTYLRIFRTW 341
           + +WTYL +  TW
Sbjct: 42  IQAWTYLILLTTW 54


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 311 LKSLVSPPGRLTVTRSPLVALISPCTKP 228
           ++S V+P     +TR  LV  +S  +KP
Sbjct: 360 VRSPVTPADLRLLTRGRLVLTVSSVSKP 387


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 266 SPLVALISPCTKPSFSSGTQHAFLPS 189
           SPL    SP  KP+ S+ +Q+   P+
Sbjct: 145 SPLSVSTSPPGKPATSTASQNLSSPA 170


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 266 SPLVALISPCTKPSFSSGTQHAFLPS 189
           SPL    SP  KP+ S+ +Q+   P+
Sbjct: 145 SPLSVSTSPPGKPATSTASQNLSSPA 170


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 386 LRYVKLDISSHFSYLGGLTC 327
           L  ++  IS+HFS++    C
Sbjct: 62  LGIIQFPISAHFSFMSRFLC 81


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 386 LRYVKLDISSHFSYLGGLTC 327
           L  ++  IS+HFS++    C
Sbjct: 18  LGIIQFPISAHFSFMSRFLC 37


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 266 SPLVALISPCTKPSFSSGTQHAFLPS 189
           SPL    SP  KP+ S+ +Q+   P+
Sbjct: 145 SPLSVSTSPPGKPATSTASQNLSSPA 170


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 266 SPLVALISPCTKPSFSSGTQHAFLPS 189
           SPL    SP  KP+ S+ +Q+   P+
Sbjct: 145 SPLSVSTSPPGKPATSTASQNLSSPA 170


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 266 SPLVALISPCTKPSFSSGTQHAFLPS 189
           SPL    SP  KP+ S+ +Q+   P+
Sbjct: 101 SPLSVSTSPPGKPATSTASQNLSSPA 126


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 266 SPLVALISPCTKPSFSSGTQHAFLPS 189
           SPL    SP  KP+ S+ +Q+   P+
Sbjct: 145 SPLSVSTSPPGKPATSTASQNLSSPA 170


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 266 SPLVALISPCTKPSFSSGTQHAFLPS 189
           SPL    SP  KP+ S+ +Q+   P+
Sbjct: 145 SPLSVSTSPPGKPATSTASQNLSSPA 170


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,367
Number of Sequences: 336
Number of extensions: 3777
Number of successful extensions: 20
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)