Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_P15
         (662 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    24   3.7  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   6.5  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   6.5  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   6.5  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    23   6.5  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    23   6.5  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   8.6  

>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
 Frame = -1

Query: 233 KPS-FSSGTQHAFLPS*GLLWSIRFCSRE-TNRYGVGSGSSPSWTTGFG 93
           KP+ F+S     FLP  G  W +     E  ++Y      S  W T FG
Sbjct: 439 KPTNFTSSASSCFLPEAGARWDVSGVPIEMESKYRNADIRSLCWETMFG 487


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 158 SRETNRYGVGSGSSPSWTTGFGIFGGLTRLLG 63
           +R TNR       SPS  +G G FGG  ++ G
Sbjct: 394 ARFTNRAPSKEDLSPSSLSGTGPFGGSCQIHG 425


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 158 SRETNRYGVGSGSSPSWTTGFGIFGGLTRLLG 63
           +R TNR       SPS  +G G FGG  ++ G
Sbjct: 394 ARFTNRAPSKEDLSPSSLSGTGPFGGSCQIHG 425


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
 Frame = +1

Query: 157  EQKRIDQS-----KPYDGKKACWVPDEKEG 231
            EQ++I +S      PYD     W PDE  G
Sbjct: 1126 EQRKIRKSIIRGQNPYDSAGDLWYPDEPPG 1155


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 19/62 (30%), Positives = 23/62 (37%)
 Frame = +1

Query: 133 TPYLFVSLEQKRIDQSKPYDGKKACWVPDEKEGFVQGEIKATKGDLVTVNLPGGETKDFK 312
           +PY    L Q R  Q  PYD           EG    +   TKG   T    G +T +  
Sbjct: 50  SPYTNHHLHQTRTAQESPYDASIQAACKQIYEGSYSSKDCGTKG---TSGNNGTDTSNGY 106

Query: 313 KD 318
           KD
Sbjct: 107 KD 108


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 19/62 (30%), Positives = 23/62 (37%)
 Frame = +1

Query: 133 TPYLFVSLEQKRIDQSKPYDGKKACWVPDEKEGFVQGEIKATKGDLVTVNLPGGETKDFK 312
           +PY    L Q R  Q  PYD           EG    +   TKG   T    G +T +  
Sbjct: 50  SPYTNHHLHQTRTAQESPYDASIQAACKQIYEGSYSSKDCGTKG---TSGNNGTDTSNGY 106

Query: 313 KD 318
           KD
Sbjct: 107 KD 108


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 460 CVAINPYKRFP 492
           C A +PYKRFP
Sbjct: 728 CPASHPYKRFP 738


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 735,474
Number of Sequences: 2352
Number of extensions: 17069
Number of successful extensions: 37
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)