Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_P07
         (595 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    24   1.3  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    24   1.3  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    24   1.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   1.7  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   3.0  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   5.2  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   6.9  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   9.1  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -3

Query: 182 FDVFRRLRRRYPGNIFITSTVHFNYYHTFVAEQ 84
           +D  ++    + G    T   ++  YHT VAEQ
Sbjct: 153 YDKLKKKLEEWTGKNITTPWDYYYIYHTLVAEQ 185


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -3

Query: 182 FDVFRRLRRRYPGNIFITSTVHFNYYHTFVAEQ 84
           +D  ++    + G    T   ++  YHT VAEQ
Sbjct: 168 YDKLKKKLEEWTGKNITTPWDYYYIYHTLVAEQ 200


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -3

Query: 182 FDVFRRLRRRYPGNIFITSTVHFNYYHTFVAEQ 84
           +D  ++    + G    T   ++  YHT VAEQ
Sbjct: 56  YDKLKKKLEEWTGKNITTPWDYYYIYHTLVAEQ 88


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 19/78 (24%), Positives = 31/78 (39%)
 Frame = +3

Query: 282 DESDGDNGECRGRQQNGGARGKLSYNGYSEECLDRLEPNGNIPNDKDSHYEWSEGGNGEY 461
           D++D D+ EC  ++        L YN       D       + +   SHY+ +  GN E 
Sbjct: 197 DKNDPDSKECSNQEYEIMKDNLLLYNHARLMSQDN-HSKEYLVSIMFSHYDRNNNGNLER 255

Query: 462 RVRRQLSVSSDSKLLXEG 515
               Q + + D + L  G
Sbjct: 256 EELEQFAENEDLEELCRG 273


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 39  NYFENNMCYFVR 74
           N+F+N  CYF R
Sbjct: 532 NWFQNTFCYFRR 543


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -1

Query: 220 IAPPLFSLIVTPSLTFFEDCEDDTPGTFLSLAQYIL 113
           +A   FSL++T  L + ++   D P    S+ + +L
Sbjct: 314 LALAAFSLMLTSILRYLQELHVDAPTWISSVTESVL 349


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 384 DRDTLQSIHCKRASPGPRR 328
           +R+   S+ C RA PG ++
Sbjct: 83  EREASVSLFCPRAKPGEKK 101


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 18/56 (32%), Positives = 20/56 (35%)
 Frame = +3

Query: 372 ECLDRLEPNGNIPNDKDSHYEWSEGGNGEYRVRRQLSVSSDSKLLXEGAREEARVV 539
           E  D   PN  I          S    GE    R+ S SSDS LL   A +    V
Sbjct: 396 ELSDLHHPNCKINRKVHHTTSSSSAAGGEGLADRRGSESSDSVLLSPEASKATEAV 451


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,764
Number of Sequences: 438
Number of extensions: 3369
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)