Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_P06
         (443 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1113 - 24068441-24068923                                         28   2.9  
06_03_1058 + 27254195-27254382,27255041-27255116,27255254-272554...    27   6.8  
06_01_0486 - 3455030-3455770                                           27   6.8  
11_03_0044 - 9198016-9199143,9199579-9199674,9199771-9199846,920...    27   9.0  
07_03_0437 + 18197454-18197516,18198025-18198078,18198557-18198787     27   9.0  
01_06_1377 + 36764461-36765339                                         27   9.0  

>07_03_1113 - 24068441-24068923
          Length = 160

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -3

Query: 138 KKLRCWFWGCLRAWSGQRHGQQSE 67
           KK R W WGC     G  HG++SE
Sbjct: 63  KKQRLWRWGC----GGSPHGEESE 82


>06_03_1058 +
           27254195-27254382,27255041-27255116,27255254-27255418,
           27255580-27255671,27255713-27255754,27256342-27256387,
           27258456-27258683
          Length = 278

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -3

Query: 162 DVVQACVWKKLRCWFWGCLRAWSGQRHG-QQSEEN 61
           + ++ C+ + + C  WG L+ WS    G QQ  EN
Sbjct: 173 ECIRPCMSRTISCAAWGELQLWSSLPVGEQQMSEN 207


>06_01_0486 - 3455030-3455770
          Length = 246

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 13/38 (34%), Positives = 15/38 (39%)
 Frame = +1

Query: 139 PYTGLDYVYTPGLVPPVISPYASPAAVPITYSALPSAT 252
           PY      Y P  +PP   PY  P   P T   +P  T
Sbjct: 91  PYVPSPPPYVPPYIPPPTPPYVPPYIPPPTPPYVPPPT 128


>11_03_0044 -
           9198016-9199143,9199579-9199674,9199771-9199846,
           9200330-9200547,9200703-9200918,9201336-9201521,
           9201607-9201708,9201828-9202495,9203248-9203314
          Length = 918

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 142 YTGLDYVYTPGLVPPVIS 195
           Y GL  V+TP L+ PVIS
Sbjct: 78  YVGLSTVHTPALLTPVIS 95


>07_03_0437 + 18197454-18197516,18198025-18198078,18198557-18198787
          Length = 115

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 153 QACVWKKLRCWFWG 112
           Q  V +K RCWFWG
Sbjct: 21  QGVVKEKNRCWFWG 34


>01_06_1377 + 36764461-36765339
          Length = 292

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = +1

Query: 169 PGLVPPVISPYASPAAVPITYSALPSATY 255
           P   PP  SPY  P   P  YSA P   Y
Sbjct: 160 PQYPPPSSSPYYFPPPPPPAYSAPPPPQY 188


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,800,537
Number of Sequences: 37544
Number of extensions: 156495
Number of successful extensions: 539
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 847740284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)