Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_P04
         (439 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_16876| Best HMM Match : Hydrolase (HMM E-Value=1.8e-06)             32   0.18 
SB_32744| Best HMM Match : Sulfatase (HMM E-Value=0)                   32   0.18 
SB_10560| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.42 
SB_23661| Best HMM Match : UPF0089 (HMM E-Value=9.3e-08)               27   5.1  
SB_40048| Best HMM Match : UPF0089 (HMM E-Value=9.3e-08)               27   5.1  

>SB_16876| Best HMM Match : Hydrolase (HMM E-Value=1.8e-06)
          Length = 595

 Score = 32.3 bits (70), Expect = 0.18
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = +3

Query: 282 AELKRPNFVLILTDDQDVVLGGM 350
           AE  + N VL+LTDDQD VLG M
Sbjct: 331 AEGTQSNIVLVLTDDQDQVLGSM 353


>SB_32744| Best HMM Match : Sulfatase (HMM E-Value=0)
          Length = 485

 Score = 32.3 bits (70), Expect = 0.18
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = +3

Query: 282 AELKRPNFVLILTDDQDVVLGGM 350
           AE  + N VL+LTDDQD VLG M
Sbjct: 28  AEGTQSNIVLVLTDDQDQVLGSM 50


>SB_10560| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 721

 Score = 31.1 bits (67), Expect = 0.42
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 291 KRPNFVLILTDDQDVVLGGM 350
           ++PN + I+TDDQD  LG M
Sbjct: 96  RKPNIIFIMTDDQDTELGSM 115


>SB_23661| Best HMM Match : UPF0089 (HMM E-Value=9.3e-08)
          Length = 490

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +1

Query: 85  FYYXPFKWSLVKSVGFFTVGVVIASE 162
           F +  FKW+    V ++ +G+++ASE
Sbjct: 39  FLFRVFKWTQAAVVSYYKLGLILASE 64


>SB_40048| Best HMM Match : UPF0089 (HMM E-Value=9.3e-08)
          Length = 535

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +1

Query: 85  FYYXPFKWSLVKSVGFFTVGVVIASE 162
           F +  FKW+    V ++ +G+++ASE
Sbjct: 39  FLFRVFKWTQAAVVSYYKLGLILASE 64


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,856,983
Number of Sequences: 59808
Number of extensions: 182817
Number of successful extensions: 366
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 847047381
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)