Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_P04
         (439 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domai...    30   0.85 
Z73103-6|CAE17680.1|   55|Caenorhabditis elegans Hypothetical pr...    29   1.5  
AL022593-2|CAN99662.1|   99|Caenorhabditis elegans Hypothetical ...    27   6.0  
U41540-5|AAK39229.2|  666|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domain
           protein protein 1 protein.
          Length = 709

 Score = 29.9 bits (64), Expect = 0.85
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +3

Query: 300 NFVLILTDDQDVVLGGM 350
           N +LILTDDQD+ LG M
Sbjct: 36  NVILILTDDQDIELGSM 52


>Z73103-6|CAE17680.1|   55|Caenorhabditis elegans Hypothetical
           protein C08F8.9 protein.
          Length = 55

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +1

Query: 76  VKXFYYXPFKWSLVKSVGFFTVGVVIA 156
           V   Y  PF WS+ K V  F VGVV+A
Sbjct: 18  VNTVYNDPFFWSVFKGVIGFGVGVVVA 44


>AL022593-2|CAN99662.1|   99|Caenorhabditis elegans Hypothetical
           protein C49G9.2 protein.
          Length = 99

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 106 WSLVKSVGFFTVGVVIASECT 168
           W  +K  G F +GVV+ S CT
Sbjct: 7   WLQIKQFGIFFLGVVVGSFCT 27


>U41540-5|AAK39229.2|  666|Caenorhabditis elegans Hypothetical
           protein F35H12.4 protein.
          Length = 666

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -1

Query: 271 FTKNIKNKYCNIVLYLKNNINK 206
           FTKN+ NKY N  L LK+ +++
Sbjct: 150 FTKNVPNKYENHALMLKSLLSR 171


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,218,996
Number of Sequences: 27780
Number of extensions: 140756
Number of successful extensions: 299
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 299
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)