BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_P02
(431 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 27 0.22
CR954257-10|CAJ14161.1| 519|Anopheles gambiae Sply, Sphingosine... 23 6.1
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 27.5 bits (58), Expect = 0.22
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = +1
Query: 199 CSSTGRNICGFC---SRVKSSH*REGRLCKKDNF 291
CS G+ +CG C R +GR C+ DNF
Sbjct: 560 CSGRGQCVCGVCVCERRPNPDELIDGRYCECDNF 593
>CR954257-10|CAJ14161.1| 519|Anopheles gambiae Sply,
Sphingosine-phosphate lyase protein.
Length = 519
Score = 22.6 bits (46), Expect = 6.1
Identities = 11/36 (30%), Positives = 15/36 (41%)
Frame = +2
Query: 152 RIKALTVSANEGFVRAALQQGVTYAAFVHESRALTE 259
R+ A N GF++ Q G Y H+S E
Sbjct: 69 RVDAEIEKINAGFIKDISQTGNYYTELPHDSMGQAE 104
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 376,687
Number of Sequences: 2352
Number of extensions: 6508
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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