Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_P02
(431 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001845-1|AAH01845.1| 421|Homo sapiens chromosome 7 open readi... 69 9e-12
BC000769-1|AAH00769.1| 421|Homo sapiens chromosome 7 open readi... 69 9e-12
AK024820-1|BAB15019.1| 421|Homo sapiens protein ( Homo sapiens ... 69 9e-12
BC111054-1|AAI11055.1| 725|Homo sapiens FGD3 protein protein. 32 0.96
BC032429-1|AAH32429.1| 725|Homo sapiens FGD3 protein protein. 32 0.96
AY211386-1|AAP20645.1| 634|Homo sapiens FGD3 protein. 32 0.96
AL451065-1|CAI95107.1| 725|Homo sapiens FYVE, RhoGEF and PH dom... 32 0.96
AL389924-2|CAI41118.1| 725|Homo sapiens FYVE, RhoGEF and PH dom... 32 0.96
AK000004-1|BAA92229.1| 698|Homo sapiens FLJ00004 protein protein. 32 0.96
>BC001845-1|AAH01845.1| 421|Homo sapiens chromosome 7 open reading
frame 25 protein.
Length = 421
Score = 68.5 bits (160), Expect = 9e-12
Identities = 37/89 (41%), Positives = 51/89 (57%)
Frame = +2
Query: 2 PMEKKRTVLLKEMITVYPDDFGGEDDYPRQNLKVRGHVRVRSKIIFNFGHRIKALTVSAN 181
P E++R +L + I V PD + L + RS IF G +KA+T++AN
Sbjct: 321 PGERERATVLIKRINVVPD----QPSERALRLVASSKINSRSLTIFGTGDTLKAITMTAN 376
Query: 182 EGFVRAALQQGVTYAAFVHESRALTEGKE 268
GFVRAA QGV ++ F+H+ RALTE KE
Sbjct: 377 SGFVRAANNQGVKFSVFIHQPRALTESKE 405
>BC000769-1|AAH00769.1| 421|Homo sapiens chromosome 7 open reading
frame 25 protein.
Length = 421
Score = 68.5 bits (160), Expect = 9e-12
Identities = 37/89 (41%), Positives = 51/89 (57%)
Frame = +2
Query: 2 PMEKKRTVLLKEMITVYPDDFGGEDDYPRQNLKVRGHVRVRSKIIFNFGHRIKALTVSAN 181
P E++R +L + I V PD + L + RS IF G +KA+T++AN
Sbjct: 321 PGERERATVLIKRINVVPD----QPSERALRLVASSKINSRSLTIFGTGDTLKAITMTAN 376
Query: 182 EGFVRAALQQGVTYAAFVHESRALTEGKE 268
GFVRAA QGV ++ F+H+ RALTE KE
Sbjct: 377 SGFVRAANNQGVKFSVFIHQPRALTESKE 405
>AK024820-1|BAB15019.1| 421|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21167 fis, clone CAS10861. ).
Length = 421
Score = 68.5 bits (160), Expect = 9e-12
Identities = 37/89 (41%), Positives = 51/89 (57%)
Frame = +2
Query: 2 PMEKKRTVLLKEMITVYPDDFGGEDDYPRQNLKVRGHVRVRSKIIFNFGHRIKALTVSAN 181
P E++R +L + I V PD + L + RS IF G +KA+T++AN
Sbjct: 321 PGERERATVLIKRINVVPD----QPSERALRLVASSKINSRSLTIFGTGDTLKAITMTAN 376
Query: 182 EGFVRAALQQGVTYAAFVHESRALTEGKE 268
GFVRAA QGV ++ F+H+ RALTE KE
Sbjct: 377 SGFVRAANNQGVKFSVFIHQPRALTESKE 405
>BC111054-1|AAI11055.1| 725|Homo sapiens FGD3 protein protein.
Length = 725
Score = 31.9 bits (69), Expect = 0.96
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 148 SSNQSAYSLGKRRLRQGCSSTGRNICGFCSRVKSSH*REGRLCK 279
S ++ S+ KRR C G ICG CS K+ + R+ R+C+
Sbjct: 540 SCGETFNSITKRR--HHCKLCGAVICGKCSEFKAENSRQSRVCR 581
>BC032429-1|AAH32429.1| 725|Homo sapiens FGD3 protein protein.
Length = 725
Score = 31.9 bits (69), Expect = 0.96
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 148 SSNQSAYSLGKRRLRQGCSSTGRNICGFCSRVKSSH*REGRLCK 279
S ++ S+ KRR C G ICG CS K+ + R+ R+C+
Sbjct: 540 SCGETFNSITKRR--HHCKLCGAVICGKCSEFKAENSRQSRVCR 581
>AY211386-1|AAP20645.1| 634|Homo sapiens FGD3 protein.
Length = 634
Score = 31.9 bits (69), Expect = 0.96
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 148 SSNQSAYSLGKRRLRQGCSSTGRNICGFCSRVKSSH*REGRLCK 279
S ++ S+ KRR C G ICG CS K+ + R+ R+C+
Sbjct: 540 SCGETFNSITKRR--HHCKLCGAVICGKCSEFKAENSRQSRVCR 581
>AL451065-1|CAI95107.1| 725|Homo sapiens FYVE, RhoGEF and PH domain
containing 3 protein.
Length = 725
Score = 31.9 bits (69), Expect = 0.96
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 148 SSNQSAYSLGKRRLRQGCSSTGRNICGFCSRVKSSH*REGRLCK 279
S ++ S+ KRR C G ICG CS K+ + R+ R+C+
Sbjct: 540 SCGETFNSITKRR--HHCKLCGAVICGKCSEFKAENSRQSRVCR 581
>AL389924-2|CAI41118.1| 725|Homo sapiens FYVE, RhoGEF and PH domain
containing 3 protein.
Length = 725
Score = 31.9 bits (69), Expect = 0.96
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 148 SSNQSAYSLGKRRLRQGCSSTGRNICGFCSRVKSSH*REGRLCK 279
S ++ S+ KRR C G ICG CS K+ + R+ R+C+
Sbjct: 540 SCGETFNSITKRR--HHCKLCGAVICGKCSEFKAENSRQSRVCR 581
>AK000004-1|BAA92229.1| 698|Homo sapiens FLJ00004 protein protein.
Length = 698
Score = 31.9 bits (69), Expect = 0.96
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 148 SSNQSAYSLGKRRLRQGCSSTGRNICGFCSRVKSSH*REGRLCK 279
S ++ S+ KRR C G ICG CS K+ + R+ R+C+
Sbjct: 604 SCGETFNSITKRR--HHCKLCGAVICGKCSEFKAENSRQSRVCR 645
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,371,102
Number of Sequences: 237096
Number of extensions: 820979
Number of successful extensions: 1620
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1620
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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