Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_P02
         (431 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-141|AAF47417.1|  604|Drosophila melanogaster CG13886-PA...    68   6e-12
BT001782-1|AAN71537.1|  371|Drosophila melanogaster RH18867p pro...    67   1e-11
BT003244-1|AAO25001.1|  588|Drosophila melanogaster LD37218p pro...    29   2.0  
AY060927-1|AAL28475.1|  189|Drosophila melanogaster GM06782p pro...    29   2.0  
AE014296-2002|AAF50028.1|  575|Drosophila melanogaster CG7334-PA...    29   2.0  
AE014296-2001|AAS65032.1|  596|Drosophila melanogaster CG7334-PB...    29   2.0  

>AE014296-141|AAF47417.1|  604|Drosophila melanogaster CG13886-PA
           protein.
          Length = 604

 Score = 67.7 bits (158), Expect = 6e-12
 Identities = 36/91 (39%), Positives = 56/91 (61%)
 Frame = +2

Query: 8   EKKRTVLLKEMITVYPDDFGGEDDYPRQNLKVRGHVRVRSKIIFNFGHRIKALTVSANEG 187
           E+KR   L + +TVYPD     +++   +++   +V  RS  IF+FG   +  TV++N+ 
Sbjct: 281 ERKRAEELMKRVTVYPDVETIPEEF--SHIRFTANVNERSLKIFSFGMARQIFTVTSNKA 338

Query: 188 FVRAALQQGVTYAAFVHESRALTEGKEDSAR 280
           FVR+A  QG+    FVH S ALTEG+E+S +
Sbjct: 339 FVRSAKMQGINVPVFVHASVALTEGRENSQK 369


>BT001782-1|AAN71537.1|  371|Drosophila melanogaster RH18867p
           protein.
          Length = 371

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 36/91 (39%), Positives = 55/91 (60%)
 Frame = +2

Query: 8   EKKRTVLLKEMITVYPDDFGGEDDYPRQNLKVRGHVRVRSKIIFNFGHRIKALTVSANEG 187
           E+KR   L + +TVYPD     +++   +++   +V  RS  IF+FG   +  TV++N+ 
Sbjct: 281 ERKRAEELMKRVTVYPDVETIPEEF--SHIRFTANVNERSLKIFSFGMARQIFTVTSNKA 338

Query: 188 FVRAALQQGVTYAAFVHESRALTEGKEDSAR 280
           FVR+A  QG+    FVH S ALTEGK+ + R
Sbjct: 339 FVRSAKMQGINVPVFVHASVALTEGKQATGR 369


>BT003244-1|AAO25001.1|  588|Drosophila melanogaster LD37218p
           protein.
          Length = 588

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +2

Query: 95  LKVRGHVRVRSKIIFNFGHRIKALTVSANEGFV-RAALQQGVTYAAF 232
           LK  GHV   S ++F FG R    ++  N  ++    L  GVT+  F
Sbjct: 435 LKKIGHVNAMSVVLFGFGVRFILYSMLQNPWYILPIELMNGVTFGLF 481


>AY060927-1|AAL28475.1|  189|Drosophila melanogaster GM06782p
           protein.
          Length = 189

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +2

Query: 95  LKVRGHVRVRSKIIFNFGHRIKALTVSANEGFV-RAALQQGVTYAAF 232
           LK  GHV   S ++F FG R    ++  N  ++    L  GVT+  F
Sbjct: 20  LKKIGHVNAMSVVLFGFGVRFILYSMLQNPWYILPIELMNGVTFGLF 66


>AE014296-2002|AAF50028.1|  575|Drosophila melanogaster CG7334-PA,
           isoform A protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +2

Query: 95  LKVRGHVRVRSKIIFNFGHRIKALTVSANEGFV-RAALQQGVTYAAF 232
           LK  GHV   S ++F FG R    ++  N  ++    L  GVT+  F
Sbjct: 406 LKKIGHVNAMSVVLFGFGVRFILYSMLQNPWYILPIELMNGVTFGLF 452


>AE014296-2001|AAS65032.1|  596|Drosophila melanogaster CG7334-PB,
           isoform B protein.
          Length = 596

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +2

Query: 95  LKVRGHVRVRSKIIFNFGHRIKALTVSANEGFV-RAALQQGVTYAAF 232
           LK  GHV   S ++F FG R    ++  N  ++    L  GVT+  F
Sbjct: 427 LKKIGHVNAMSVVLFGFGVRFILYSMLQNPWYILPIELMNGVTFGLF 473


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,827,700
Number of Sequences: 53049
Number of extensions: 274941
Number of successful extensions: 745
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1355285490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)