Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_O23
         (706 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0260 - 15509658-15509780,15510092-15510161,15510265-155104...    29   3.6  
03_02_0532 + 9255634-9257034,9257234-9257347,9257975-9258239,925...    29   4.8  
01_01_1084 - 8521796-8522389,8522503-8522983,8523084-8523190           29   4.8  
10_02_0200 - 6672743-6673717,6676257-6676634,6677017-6677301,667...    28   6.3  
01_06_1196 + 35322662-35324212                                         28   8.3  

>11_04_0260 -
           15509658-15509780,15510092-15510161,15510265-15510438,
           15511098-15511528
          Length = 265

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 347 DDQSGDGE*AHHGRHLFISRQKSPHPRDFNRGTANIEILN 228
           DD+SG G  + +G ++ +SR    HP+  N  T    +LN
Sbjct: 129 DDRSGYGAASRYGNNIAVSRPAGRHPQGLNSLTCE-RVLN 167


>03_02_0532 +
           9255634-9257034,9257234-9257347,9257975-9258239,
           9258346-9258461
          Length = 631

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = +3

Query: 456 TNDRFMASIGNGHVAANVFSDTVYMNGLYNGNKGESHRARI-PNWANI 596
           T+ RF  + G+   A++ FSD  +M+G+ +     S  AR+ P+++++
Sbjct: 124 TSGRFSEASGSASTASDRFSDHPFMDGMLDRASSASSTARLMPSFSHL 171


>01_01_1084 - 8521796-8522389,8522503-8522983,8523084-8523190
          Length = 393

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -3

Query: 452 QPECGKNFRIVVDILRLFIIGSRMATFATFSCHYNDDQS 336
           QP  G   R+  DI  L  + SR+AT  T SC  + D +
Sbjct: 212 QPSPGTRCRVCSDIASLDGLYSRLATLCTISCWAHADHA 250


>10_02_0200 -
           6672743-6673717,6676257-6676634,6677017-6677301,
           6677420-6677570,6677696-6677930,6678689-6678764
          Length = 699

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 443 IQVANQR*IHGVYRQWSRSSERIQRYGL 526
           + ++ QR IH V  +WSR S+   RY L
Sbjct: 144 VDLSGQRFIHSVRNKWSRMSKITSRYPL 171


>01_06_1196 + 35322662-35324212
          Length = 516

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 19/72 (26%), Positives = 34/72 (47%)
 Frame = -3

Query: 545 VIQSVHVDRIAEYVRCYVTIAYRRHESIVGWQPECGKNFRIVVDILRLFIIGSRMATFAT 366
           V+  +HV  I++YV C +  AYR        + E   NF  V+ ++   + G+    ++ 
Sbjct: 203 VVALLHVTCISQYVVCNLYWAYRSRS-----RSEFADNFFFVLGVVAPVVAGA-YTVYSP 256

Query: 365 FSCHYNDDQSGD 330
                +DD SG+
Sbjct: 257 LGRDTDDDASGE 268


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,125,010
Number of Sequences: 37544
Number of extensions: 321793
Number of successful extensions: 690
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)