Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_O19
(750 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC24H6.04 |hxk1||hexokinase 1 |Schizosaccharomyces pombe|chr 1... 133 3e-32
SPAC4F8.07c |hxk2||hexokinase 2 |Schizosaccharomyces pombe|chr 1... 103 4e-23
SPAC1B2.03c |||GNS1/SUR4 family protein|Schizosaccharomyces pomb... 27 2.2
SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit Alp... 27 3.8
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 27 3.8
SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyce... 27 3.8
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 26 5.0
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 5.0
SPAC1952.01 ||SPAC1B3.19|Pig-U|Schizosaccharomyces pombe|chr 1||... 26 6.6
SPAC19E9.03 |pas1|SPAC57A10.01|cyclin Pas1|Schizosaccharomyces p... 26 6.6
SPAC6C3.06c |||P-type ATPase, calcium transporting|Schizosacchar... 25 8.7
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 25 8.7
SPBC887.10 |mcs4||two-component response regulator |Schizosaccha... 25 8.7
>SPAC24H6.04 |hxk1||hexokinase 1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 484
Score = 133 bits (321), Expect = 3e-32
Identities = 76/199 (38%), Positives = 109/199 (54%), Gaps = 2/199 (1%)
Frame = +1
Query: 130 DNLQRIREECEVLKMTDKQIKEIMCRLHNDLKKGLSRADHDKATVKCWITYIQDLPNGKE 309
D+L + E+ + + + + R ++L KGL+ D V WI P+G E
Sbjct: 29 DHLDELEEQFTI---PTELLHRVTDRFVSELYKGLTTNPGDVPMVPTWII---GTPDGNE 82
Query: 310 RGKFLALDLGGTNFRVLIINL-GENHFDMQSKIYAIPKHIMTGTGIALFDHIAECLANFM 486
G +LALDLGGTN RV + + G FD+ Y +P+ + GT ALFD+IA+C+ F+
Sbjct: 83 HGSYLALDLGGTNLRVCAVEVQGNGKFDITQSKYRLPQELKVGTREALFDYIADCIKKFV 142
Query: 487 KE-HGVYEERLALGFTFSFPLKQLGLTKGVLQRWTKGFSCSGVVGEDVVQGLKDAIARRG 663
+E H + L +GFTFS+P Q + L WTKGF GV GE V L A+ R G
Sbjct: 143 EEVHPGKSQNLEIGFTFSYPCVQRSINDASLVAWTKGFDIDGVEGESVGPLLSAALKRVG 202
Query: 664 DVQIDICAILNDTTGTLMS 720
+ + AIL+DTTGTL++
Sbjct: 203 CNNVRLNAILSDTTGTLVA 221
>SPAC4F8.07c |hxk2||hexokinase 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 455
Score = 103 bits (246), Expect = 4e-23
Identities = 59/158 (37%), Positives = 90/158 (56%), Gaps = 8/158 (5%)
Frame = +1
Query: 280 YIQDLPNGKERGKFLALDLGGTNFRVLIINL-GENHFDMQSKIYAIPKHIMTGTGIA-LF 453
+I LP G E G FLALD GGTN RV I L G+ ++M+ +P+ + + +
Sbjct: 51 FISTLPTGAETGDFLALDFGGTNLRVCWIQLLGDGKYEMKHSKSVLPRECVRNESVKPII 110
Query: 454 DHIAECLANFMKEH-----GVYEER-LALGFTFSFPLKQLGLTKGVLQRWTKGFSCSGVV 615
D +++ + F+KEH G EE L +GFTFS+P Q+ +T+ L RWTKG + +
Sbjct: 111 DFMSDHVELFIKEHFPSKFGCPEEEYLPMGFTFSYPANQVSITESYLLRWTKGLNIPEAI 170
Query: 616 GEDVVQGLKDAIARRGDVQIDICAILNDTTGTLMSCAW 729
+D Q L + R ++ I I A++NDT GTL++ A+
Sbjct: 171 NKDFAQFLTEGFKAR-NLPIRIEAVINDTVGTLVTRAY 207
>SPAC1B2.03c |||GNS1/SUR4 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 146 ILCKLSTTMPIFYRYFPYLTPIGN 75
ILC T I +RYFP+L +G+
Sbjct: 233 ILCYFGTYSHIAFRYFPWLPHVGD 256
>SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit
Alp13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +1
Query: 145 IREECEVLKMTDKQIKEIMCRLHNDLKKGLSRADHDKATVKCWITYIQD 291
IR++ +M D E + RL L + + R + D +++C + YI++
Sbjct: 259 IRQQYPDTEMCDLYGVEHLIRLFVSLPELIDRTNMDSQSIECLLNYIEE 307
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 26.6 bits (56), Expect = 3.8
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Frame = +1
Query: 337 GGTNFRVLIINLGENHFDMQSKIYAIPKHIMTGTGIALFD---HIAECLA----NFMKEH 495
G +L +G++ S I K I GTGI++FD +I C +F K+H
Sbjct: 300 GSGKTTLLAYVVGDHPKLFASNIKFFGKSIGPGTGISIFDIQENIGHCSPEIHNHFPKQH 359
Query: 496 GVYEERL-ALGFTFSFP 543
+E L A TF+ P
Sbjct: 360 TCFEALLSAWSTTFTIP 376
>SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 906
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +1
Query: 181 KQIKEIMCRLHNDLKKGLSRADHDKATVKCWITYIQDLPN 300
++IK+++ L +K GL+ +DH + C++ I D P+
Sbjct: 433 QEIKQLIRLLEELIKTGLATSDHRLLLLSCYVE-IHDSPS 471
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 26.2 bits (55), Expect = 5.0
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 662 PLLAIASLRPCTTSSPTTPEQEKPLVHLCNTPFVRPS 552
P I+ C +S P+TP+++K + N P P+
Sbjct: 245 PYFPISPAISCASSCPSTPDEQKNFFIVGNAPQQTPA 281
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 26.2 bits (55), Expect = 5.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 9 LHFLAVEASRVVICKFEVV 65
LH LA++ S++V CK EVV
Sbjct: 249 LHSLAIKLSKLVTCKNEVV 267
>SPAC1952.01 ||SPAC1B3.19|Pig-U|Schizosaccharomyces pombe|chr
1|||Manual
Length = 408
Score = 25.8 bits (54), Expect = 6.6
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 599 LVPVWSAKMLYRALKMLSPEEGMYRLTYALF 691
L W A+ LYR +++ +P G R+ L+
Sbjct: 23 LANTWIAEFLYRRIEVSTPVSGFLRVREGLY 53
>SPAC19E9.03 |pas1|SPAC57A10.01|cyclin Pas1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 6.6
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -2
Query: 701 VSFRIAHMSICTSPLLAIASLRPCTTSSPTTPEQEKPLVHLCNTPFVRPSCFSGKLN 531
++ ++A M++C + + A R TT+SP PEQ PL+ +V P G+L+
Sbjct: 255 IAKQLAPMNVCKAHIQASNQSRTLTTASP--PEQ-IPLME--PQVYVNPQVLPGRLS 306
>SPAC6C3.06c |||P-type ATPase, calcium
transporting|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1033
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 587 LKVSLVPVWSAKMLYRALK 643
L +SL+PVW K L R LK
Sbjct: 1006 LFISLLPVWCGKALKRKLK 1024
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +1
Query: 289 DLPNGKERGKFLALDLGGTNFRVLIINLGENHFDMQSKI 405
DLP + + +D G +N+ V I+ F ++S +
Sbjct: 191 DLPEPESPRRVAIVDFGHSNYSVSIVEFSRGQFHIKSTV 229
>SPBC887.10 |mcs4||two-component response regulator
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 522
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +1
Query: 592 GFSCSGVVGED-VVQGLKDAIARRGDVQI 675
G + S ++ ED +V LKDAIAR+ ++I
Sbjct: 11 GITSSVILSEDHLVDDLKDAIARKFPIRI 39
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,247,890
Number of Sequences: 5004
Number of extensions: 71171
Number of successful extensions: 198
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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