Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_O19
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75535-3|CAH04733.1| 495|Caenorhabditis elegans Hypothetical pr... 215 2e-56
Z75535-2|CAA99826.1| 500|Caenorhabditis elegans Hypothetical pr... 210 6e-55
Z92797-1|CAB07234.1| 552|Caenorhabditis elegans Hypothetical pr... 169 2e-42
AC024214-19|AAF36071.1| 451|Caenorhabditis elegans Hypothetical... 122 2e-28
Z69902-11|CAA93766.2| 935|Caenorhabditis elegans Hypothetical p... 30 2.0
Z35719-4|CAA84798.1| 279|Caenorhabditis elegans Hypothetical pr... 30 2.0
U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel t... 30 2.0
DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-t... 30 2.0
AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-t... 30 2.0
AL033535-1|CAB70217.1| 935|Caenorhabditis elegans Hypothetical ... 30 2.0
U50197-4|AAA91257.1| 443|Caenorhabditis elegans Intermediate fi... 29 2.7
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 29 4.7
Z82070-7|CAB04909.1| 321|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z82070-6|CAB04910.1| 321|Caenorhabditis elegans Hypothetical pr... 28 8.1
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 28 8.1
>Z75535-3|CAH04733.1| 495|Caenorhabditis elegans Hypothetical
protein F14B4.2b protein.
Length = 495
Score = 215 bits (526), Expect = 2e-56
Identities = 109/211 (51%), Positives = 143/211 (67%), Gaps = 1/211 (0%)
Frame = +1
Query: 121 IVVDNLQRIREECEVLKMTDKQIKEIMCRLHNDLKKGLSRADHDKATVKCWITYIQDLPN 300
I V N Q I+E C+ L ++D+Q++ IM + +++GL+ + K VK TY+ +PN
Sbjct: 26 IDVSNNQMIQEACQRLVLSDQQLRRIMQSMEKSMEQGLATSTK-KVAVKMLPTYVDSVPN 84
Query: 301 GKERGKFLALDLGGTNFRVLIINLGENHFDMQSKIYAIPKHIMTGTGIALFDHIAECLAN 480
G E G FLALDLGGTNFRVL I L M KI+ +P+ IM GTG ALFDHIA C+A
Sbjct: 85 GTESGDFLALDLGGTNFRVLHIKLQGKETKMTGKIFRVPESIMRGTGEALFDHIAGCMAK 144
Query: 481 FMKEHGVYE-ERLALGFTFSFPLKQLGLTKGVLQRWTKGFSCSGVVGEDVVQGLKDAIAR 657
FM E+ + + ++L LGFTFSFP +Q GLTKG L WTKGF SGV G DVV L +A R
Sbjct: 145 FMGENDLKDAQKLPLGFTFSFPCEQEGLTKGKLVTWTKGFKASGVEGVDVVTLLHEACHR 204
Query: 658 RGDVQIDICAILNDTTGTLMSCAWKNHNCXI 750
R D+ ID+ A+LNDT GTLM+CA++ ++C I
Sbjct: 205 RKDIDIDVVALLNDTVGTLMACAFQENSCQI 235
>Z75535-2|CAA99826.1| 500|Caenorhabditis elegans Hypothetical
protein F14B4.2a protein.
Length = 500
Score = 210 bits (514), Expect = 6e-55
Identities = 105/203 (51%), Positives = 139/203 (68%), Gaps = 1/203 (0%)
Frame = +1
Query: 145 IREECEVLKMTDKQIKEIMCRLHNDLKKGLSRADHDKATVKCWITYIQDLPNGKERGKFL 324
I+E C+ L ++D+Q++ IM + +++GL+ + K VK TY+ +PNG E G FL
Sbjct: 39 IQEACQRLVLSDQQLRRIMQSMEKSMEQGLATSTK-KVAVKMLPTYVDSVPNGTESGDFL 97
Query: 325 ALDLGGTNFRVLIINLGENHFDMQSKIYAIPKHIMTGTGIALFDHIAECLANFMKEHGVY 504
ALDLGGTNFRVL I L M KI+ +P+ IM GTG ALFDHIA C+A FM E+ +
Sbjct: 98 ALDLGGTNFRVLHIKLQGKETKMTGKIFRVPESIMRGTGEALFDHIAGCMAKFMGENDLK 157
Query: 505 E-ERLALGFTFSFPLKQLGLTKGVLQRWTKGFSCSGVVGEDVVQGLKDAIARRGDVQIDI 681
+ ++L LGFTFSFP +Q GLTKG L WTKGF SGV G DVV L +A RR D+ ID+
Sbjct: 158 DAQKLPLGFTFSFPCEQEGLTKGKLVTWTKGFKASGVEGVDVVTLLHEACHRRKDIDIDV 217
Query: 682 CAILNDTTGTLMSCAWKNHNCXI 750
A+LNDT GTLM+CA++ ++C I
Sbjct: 218 VALLNDTVGTLMACAFQENSCQI 240
>Z92797-1|CAB07234.1| 552|Caenorhabditis elegans Hypothetical
protein H25P06.1 protein.
Length = 552
Score = 169 bits (410), Expect = 2e-42
Identities = 83/190 (43%), Positives = 132/190 (69%), Gaps = 2/190 (1%)
Frame = +1
Query: 169 KMTDKQIKEIMCRLHNDLKKGLSRADHDKATVKCWITYIQDLPNGKERGKFLALDLGGTN 348
K+++ ++ +M L +++ +GL + +++T+ +++ +LPNGKERGKF+A+DLGGTN
Sbjct: 55 KLSNTTLRRMMSHLSDNMDRGLE-SGLERSTIAMLPSFVPELPNGKERGKFVAMDLGGTN 113
Query: 349 FRVLIINLGENHFDMQSKIY--AIPKHIMTGTGIALFDHIAECLANFMKEHGVYEERLAL 522
RV+++ L E M++K + +P M GTG LFD+IA+ L +F+ E + +E L +
Sbjct: 114 LRVMLMEL-EPGEPMRTKQFNTRMPNAAMHGTGQKLFDYIAKALCDFLVERELADEHLPV 172
Query: 523 GFTFSFPLKQLGLTKGVLQRWTKGFSCSGVVGEDVVQGLKDAIARRGDVQIDICAILNDT 702
GFTFS+P Q GL L RWTKG + +G VGEDVVQ L+DAIAR G V+++I A++NDT
Sbjct: 173 GFTFSYPCDQTGLRSATLLRWTKGVTATGCVGEDVVQLLEDAIARDGRVKVNIVALINDT 232
Query: 703 TGTLMSCAWK 732
GT+++ A++
Sbjct: 233 VGTMVAAAYE 242
>AC024214-19|AAF36071.1| 451|Caenorhabditis elegans Hypothetical
protein Y77E11A.1 protein.
Length = 451
Score = 122 bits (295), Expect = 2e-28
Identities = 61/198 (30%), Positives = 107/198 (54%), Gaps = 2/198 (1%)
Frame = +1
Query: 145 IREECEVLKMTDKQIKEIMCRLHNDLKKGLSRADHDKATVKCWITYIQDLPNGKERGKFL 324
+ E ++ +Q++EI ++ +K GL++ +++ +Y+ LP+G E GK++
Sbjct: 8 VEEILAKFRLNREQLQEISEKVEQQMKMGLAKTQG--SSIAMLPSYVPALPDGTETGKYV 65
Query: 325 ALDLGGTNFRVLIINL-GENHFDMQSKI-YAIPKHIMTGTGIALFDHIAECLANFMKEHG 498
A+DL G N R++++ + G + Y + H+M GTG LF I CL F++E G
Sbjct: 66 AIDLSGKNLRIMLLTMNGAGTTPTHETVNYIVANHVMKGTGDQLFTFIVNCLQRFLQEFG 125
Query: 499 VYEERLALGFTFSFPLKQLGLTKGVLQRWTKGFSCSGVVGEDVVQGLKDAIARRGDVQID 678
+ + L +GF FS+P + L + L WTKGF + D+V L++A+ ++
Sbjct: 126 LVDANLPIGFVFSYPCELLSIRSARLLWWTKGFDIKDCLQRDIVALLEEALEMNMSTKVS 185
Query: 679 ICAILNDTTGTLMSCAWK 732
I A++NDT G L + A K
Sbjct: 186 IKAVMNDTVGQLAAAAHK 203
>Z69902-11|CAA93766.2| 935|Caenorhabditis elegans Hypothetical
protein C47D12.8 protein.
Length = 935
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -2
Query: 716 INVPVVSFRIAHMSICTSPLLAIASLRPCTTSSPTTPEQEKPLVHL 579
++VP R+ H +I + + LR C+TS T EQ + ++H+
Sbjct: 224 VDVPTPLRRV-HRTIIEFIKVCVRDLRTCSTSGKQTDEQNEEMIHV 268
>Z35719-4|CAA84798.1| 279|Caenorhabditis elegans Hypothetical
protein F17C8.6 protein.
Length = 279
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 460 IAECLANFM-KEHGVYEERLALGFTFSFPLKQLGLTKGVL 576
+ CL N K++ + ++G TF+FP Q LTKGV+
Sbjct: 130 LENCLKNIKAKQNNTLGKMSSIGSTFAFPQSQEVLTKGVV 169
>U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 2 protein.
Length = 1785
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 460 IAECLANFM-KEHGVYEERLALGFTFSFPLKQLGLTKGVL 576
+ CL N K++ + ++G TF+FP Q LTKGV+
Sbjct: 1636 LENCLKNIKAKQNNTLGKMSSIGSTFAFPQSQEVLTKGVV 1675
>DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1763
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 460 IAECLANFM-KEHGVYEERLALGFTFSFPLKQLGLTKGVL 576
+ CL N K++ + ++G TF+FP Q LTKGV+
Sbjct: 1614 LENCLKNIKAKQNNTLGKMSSIGSTFAFPQSQEVLTKGVV 1653
>AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1785
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 460 IAECLANFM-KEHGVYEERLALGFTFSFPLKQLGLTKGVL 576
+ CL N K++ + ++G TF+FP Q LTKGV+
Sbjct: 1636 LENCLKNIKAKQNNTLGKMSSIGSTFAFPQSQEVLTKGVV 1675
>AL033535-1|CAB70217.1| 935|Caenorhabditis elegans Hypothetical
protein C47D12.8 protein.
Length = 935
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -2
Query: 716 INVPVVSFRIAHMSICTSPLLAIASLRPCTTSSPTTPEQEKPLVHL 579
++VP R+ H +I + + LR C+TS T EQ + ++H+
Sbjct: 224 VDVPTPLRRV-HRTIIEFIKVCVRDLRTCSTSGKQTDEQNEEMIHV 268
>U50197-4|AAA91257.1| 443|Caenorhabditis elegans Intermediate
filament, d protein 2 protein.
Length = 443
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +1
Query: 142 RIREECEVLKMTDKQIKEIMCRLHNDL---KKGLSRADHDKATVKCWITY 282
++REEC L + ++ E L N++ +K + A+H + TV+ +TY
Sbjct: 365 KMREECTKLSVELDKLVENQINLRNEINHYRKLMENAEHLRTTVQTHVTY 414
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -2
Query: 725 AQDINVPVVSFRIAHMSICTSPLLAIASLRPCTTSSPTTPEQEKPLVHLCNTP 567
A+ PV++ + TSPLLA ++ R TT++ + + P H C+ P
Sbjct: 318 AEASTTPVLTSNLTSALTSTSPLLASSTERTATTATSSVSTPKHP-HHGCHVP 369
>Z82070-7|CAB04909.1| 321|Caenorhabditis elegans Hypothetical
protein W04E12.8 protein.
Length = 321
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -2
Query: 674 ICTSPLLAIASLRPCTTSSPTTPEQEKPLVHLCNTPFVRPSCFSG 540
+C +P++ A+ P TT PTT P C PSC G
Sbjct: 145 VCVTPVIMTATCPPITTPIPTTCPTPAP----CPVKTCVPSCDQG 185
>Z82070-6|CAB04910.1| 321|Caenorhabditis elegans Hypothetical
protein W04E12.6 protein.
Length = 321
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = -2
Query: 674 ICTSPLLAIASLRPCTTSSPTTPEQEKPLVHLCNTPFVRPSCFSGKLNVNPS 519
+C +P++ A+ P TT PTT P C PSC G +P+
Sbjct: 145 VCVTPVIMTATCPPITTPIPTTCPTPAP----CPIKQCVPSCDQGWTYFSPT 192
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 27.9 bits (59), Expect = 8.1
Identities = 26/93 (27%), Positives = 32/93 (34%), Gaps = 5/93 (5%)
Frame = -2
Query: 671 CTSPLLAIASLRPCTTSSPTTPEQEKPLVHLCNTPFVRPSCFSGKLNVNPSANLSS*TPC 492
C P + IA PC P P P C P P CF G V + + + P
Sbjct: 31 CNQPPIVIAGPPPCFDCPPPAPIFVAPPPPPCFGPACPPPCF-GPACVPLAPIIVNGPPP 89
Query: 491 SFIKFAKHSAMWSNRAMPVPVII-----CFGMA 408
F A P P+I+ CFG A
Sbjct: 90 CFGPACPPPCFGPACAPPAPIIVNGPPPCFGPA 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,817,087
Number of Sequences: 27780
Number of extensions: 395732
Number of successful extensions: 1095
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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