Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_O17
(801 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ247769-1|ABB05181.1| 214|Homo sapiens peroxiredoxin 5 protein. 196 1e-49
CR457203-1|CAG33484.1| 214|Homo sapiens PRDX5 protein. 196 1e-49
BC113725-1|AAI13726.1| 214|Homo sapiens peroxiredoxin 5 protein. 196 1e-49
BC113723-1|AAI13724.1| 214|Homo sapiens peroxiredoxin 5 protein. 196 1e-49
BC110983-1|AAI10984.1| 214|Homo sapiens peroxiredoxin 5 protein. 196 1e-49
AF242525-1|AAF99605.1| 214|Homo sapiens hypothetical protein SB... 196 1e-49
AF231705-1|AAF78899.1| 214|Homo sapiens Alu co-repressor 1 prot... 196 1e-49
AF110731-1|AAF03750.1| 214|Homo sapiens antioxidant enzyme B166... 196 1e-49
AJ249483-1|CAB62210.1| 162|Homo sapiens human thiol peroxidase ... 195 2e-49
AF124993-1|AAF27531.1| 162|Homo sapiens peroxisomal membrane pr... 195 2e-49
AF112212-1|AAF17200.1| 162|Homo sapiens putative peroxisomal an... 195 2e-49
AF197952-1|AAF04856.1| 214|Homo sapiens thioredoxin peroxidase ... 192 2e-48
AL590989-2|CAH70606.1| 1438|Homo sapiens patched domain containi... 33 1.2
AL117236-1|CAB55303.1| 594|Homo sapiens hypothetical protein pr... 33 1.2
AL031735-1|CAI22474.1| 1438|Homo sapiens patched domain containi... 33 1.2
AB037758-1|BAA92575.1| 1438|Homo sapiens KIAA1337 protein protein. 33 1.2
AB095941-1|BAC23117.1| 648|Homo sapiens KIAA2021 protein protein. 31 3.7
AL137077-5|CAI11048.1| 223|Homo sapiens LSM14 homolog B (SCD6, ... 30 8.5
>DQ247769-1|ABB05181.1| 214|Homo sapiens peroxiredoxin 5 protein.
Length = 214
Score = 196 bits (477), Expect = 1e-49
Identities = 95/167 (56%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Frame = +1
Query: 181 RALHISQLSMAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKT 360
R+ + +MAPIKVGD +PA ++FE P NKVN+ EL GKK VLF VPGAFTPGCSKT
Sbjct: 44 RSFSRAAAAMAPIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKT 103
Query: 361 HLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDL 540
HLPG+V+ A+ LK+ GV + C+SVND +V WG H +GKVR+LADP+G F K DL
Sbjct: 104 HLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDL 163
Query: 541 ---GTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 672
+ + G R KRFSMV+ D V+ LNVEPDGTGL+CSLA I
Sbjct: 164 LLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNI 210
>CR457203-1|CAG33484.1| 214|Homo sapiens PRDX5 protein.
Length = 214
Score = 196 bits (477), Expect = 1e-49
Identities = 95/167 (56%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Frame = +1
Query: 181 RALHISQLSMAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKT 360
R+ + +MAPIKVGD +PA ++FE P NKVN+ EL GKK VLF VPGAFTPGCSKT
Sbjct: 44 RSFSRAAAAMAPIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKT 103
Query: 361 HLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDL 540
HLPG+V+ A+ LK+ GV + C+SVND +V WG H +GKVR+LADP+G F K DL
Sbjct: 104 HLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDL 163
Query: 541 ---GTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 672
+ + G R KRFSMV+ D V+ LNVEPDGTGL+CSLA I
Sbjct: 164 LLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNI 210
>BC113725-1|AAI13726.1| 214|Homo sapiens peroxiredoxin 5 protein.
Length = 214
Score = 196 bits (477), Expect = 1e-49
Identities = 95/167 (56%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Frame = +1
Query: 181 RALHISQLSMAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKT 360
R+ + +MAPIKVGD +PA ++FE P NKVN+ EL GKK VLF VPGAFTPGCSKT
Sbjct: 44 RSFSRAAAAMAPIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKT 103
Query: 361 HLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDL 540
HLPG+V+ A+ LK+ GV + C+SVND +V WG H +GKVR+LADP+G F K DL
Sbjct: 104 HLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDL 163
Query: 541 ---GTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 672
+ + G R KRFSMV+ D V+ LNVEPDGTGL+CSLA I
Sbjct: 164 LLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNI 210
>BC113723-1|AAI13724.1| 214|Homo sapiens peroxiredoxin 5 protein.
Length = 214
Score = 196 bits (477), Expect = 1e-49
Identities = 95/167 (56%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Frame = +1
Query: 181 RALHISQLSMAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKT 360
R+ + +MAPIKVGD +PA ++FE P NKVN+ EL GKK VLF VPGAFTPGCSKT
Sbjct: 44 RSFSRAAAAMAPIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKT 103
Query: 361 HLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDL 540
HLPG+V+ A+ LK+ GV + C+SVND +V WG H +GKVR+LADP+G F K DL
Sbjct: 104 HLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDL 163
Query: 541 ---GTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 672
+ + G R KRFSMV+ D V+ LNVEPDGTGL+CSLA I
Sbjct: 164 LLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNI 210
>BC110983-1|AAI10984.1| 214|Homo sapiens peroxiredoxin 5 protein.
Length = 214
Score = 196 bits (477), Expect = 1e-49
Identities = 95/167 (56%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Frame = +1
Query: 181 RALHISQLSMAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKT 360
R+ + +MAPIKVGD +PA ++FE P NKVN+ EL GKK VLF VPGAFTPGCSKT
Sbjct: 44 RSFSRAAAAMAPIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKT 103
Query: 361 HLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDL 540
HLPG+V+ A+ LK+ GV + C+SVND +V WG H +GKVR+LADP+G F K DL
Sbjct: 104 HLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDL 163
Query: 541 ---GTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 672
+ + G R KRFSMV+ D V+ LNVEPDGTGL+CSLA I
Sbjct: 164 LLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNI 210
>AF242525-1|AAF99605.1| 214|Homo sapiens hypothetical protein
SBBI10 protein.
Length = 214
Score = 196 bits (477), Expect = 1e-49
Identities = 95/167 (56%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Frame = +1
Query: 181 RALHISQLSMAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKT 360
R+ + +MAPIKVGD +PA ++FE P NKVN+ EL GKK VLF VPGAFTPGCSKT
Sbjct: 44 RSFSRAAAAMAPIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKT 103
Query: 361 HLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDL 540
HLPG+V+ A+ LK+ GV + C+SVND +V WG H +GKVR+LADP+G F K DL
Sbjct: 104 HLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDL 163
Query: 541 ---GTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 672
+ + G R KRFSMV+ D V+ LNVEPDGTGL+CSLA I
Sbjct: 164 LLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNI 210
>AF231705-1|AAF78899.1| 214|Homo sapiens Alu co-repressor 1
protein.
Length = 214
Score = 196 bits (477), Expect = 1e-49
Identities = 95/167 (56%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Frame = +1
Query: 181 RALHISQLSMAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKT 360
R+ + +MAPIKVGD +PA ++FE P NKVN+ EL GKK VLF VPGAFTPGCSKT
Sbjct: 44 RSFSRAAAAMAPIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKT 103
Query: 361 HLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDL 540
HLPG+V+ A+ LK+ GV + C+SVND +V WG H +GKVR+LADP+G F K DL
Sbjct: 104 HLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDL 163
Query: 541 ---GTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 672
+ + G R KRFSMV+ D V+ LNVEPDGTGL+CSLA I
Sbjct: 164 LLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNI 210
>AF110731-1|AAF03750.1| 214|Homo sapiens antioxidant enzyme B166
protein.
Length = 214
Score = 196 bits (477), Expect = 1e-49
Identities = 95/167 (56%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Frame = +1
Query: 181 RALHISQLSMAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKT 360
R+ + +MAPIKVGD +PA ++FE P NKVN+ EL GKK VLF VPGAFTPGCSKT
Sbjct: 44 RSFSRAAAAMAPIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKT 103
Query: 361 HLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDL 540
HLPG+V+ A+ LK+ GV + C+SVND +V WG H +GKVR+LADP+G F K DL
Sbjct: 104 HLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDL 163
Query: 541 ---GTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 672
+ + G R KRFSMV+ D V+ LNVEPDGTGL+CSLA I
Sbjct: 164 LLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNI 210
>AJ249483-1|CAB62210.1| 162|Homo sapiens human thiol peroxidase
homologous protein protein.
Length = 162
Score = 195 bits (475), Expect = 2e-49
Identities = 94/158 (59%), Positives = 113/158 (71%), Gaps = 3/158 (1%)
Frame = +1
Query: 208 MAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNA 387
MAPIKVGD +PA ++FE P NKVN+ EL GKK VLF VPGAFTPGCSKTHLPG+V+ A
Sbjct: 1 MAPIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQA 60
Query: 388 DKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDL---GTNLPP 558
+ LK+ GV + C+SVND +V WG H +GKVR+LADP+G F K DL + +
Sbjct: 61 EALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSI 120
Query: 559 LGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 672
G R KRFSMV+ D V+ LNVEPDGTGL+CSLA I
Sbjct: 121 FGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNI 158
>AF124993-1|AAF27531.1| 162|Homo sapiens peroxisomal membrane
protein 20 protein.
Length = 162
Score = 195 bits (475), Expect = 2e-49
Identities = 94/158 (59%), Positives = 113/158 (71%), Gaps = 3/158 (1%)
Frame = +1
Query: 208 MAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNA 387
MAPIKVGD +PA ++FE P NKVN+ EL GKK VLF VPGAFTPGCSKTHLPG+V+ A
Sbjct: 1 MAPIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQA 60
Query: 388 DKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDL---GTNLPP 558
+ LK+ GV + C+SVND +V WG H +GKVR+LADP+G F K DL + +
Sbjct: 61 EALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSI 120
Query: 559 LGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 672
G R KRFSMV+ D V+ LNVEPDGTGL+CSLA I
Sbjct: 121 FGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNI 158
>AF112212-1|AAF17200.1| 162|Homo sapiens putative peroxisomal
antioxidant enzyme protein.
Length = 162
Score = 195 bits (475), Expect = 2e-49
Identities = 94/158 (59%), Positives = 113/158 (71%), Gaps = 3/158 (1%)
Frame = +1
Query: 208 MAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNA 387
MAPIKVGD +PA ++FE P NKVN+ EL GKK VLF VPGAFTPGCSKTHLPG+V+ A
Sbjct: 1 MAPIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQA 60
Query: 388 DKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDL---GTNLPP 558
+ LK+ GV + C+SVND +V WG H +GKVR+LADP+G F K DL + +
Sbjct: 61 EALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSI 120
Query: 559 LGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 672
G R KRFSMV+ D V+ LNVEPDGTGL+CSLA I
Sbjct: 121 FGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNI 158
>AF197952-1|AAF04856.1| 214|Homo sapiens thioredoxin peroxidase
PMP20 protein.
Length = 214
Score = 192 bits (467), Expect = 2e-48
Identities = 94/167 (56%), Positives = 116/167 (69%), Gaps = 3/167 (1%)
Frame = +1
Query: 181 RALHISQLSMAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKT 360
R+ + +MAPIKVGD +PA ++FE P NKVN+ EL GKK VLF VPGAFTPGCSKT
Sbjct: 44 RSFSRAAAAMAPIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKT 103
Query: 361 HLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDL 540
HLPG+V+ A+ LK+ GV + C+SVND +V WG +GKVR+LADP+G F K DL
Sbjct: 104 HLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRATKAEGKVRLLADPTGAFGKETDL 163
Query: 541 ---GTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 672
+ + G R KRFSMV+ D V+ LNVEPDGTGL+CSLA I
Sbjct: 164 LLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNI 210
>AL590989-2|CAH70606.1| 1438|Homo sapiens patched domain containing 2
protein.
Length = 1438
Score = 33.1 bits (72), Expect = 1.2
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Frame = +1
Query: 235 LPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKLKSDGVA 414
+ + LF++ P + N + KK VP A P + PG V K+KS G
Sbjct: 830 ITCSGLFQEKPHSLQNNIRTSLEKKRRGSGVPWASRPEATLQDFPGTVY-ISKVKSQGHP 888
Query: 415 EIVCVSVNDPYVMAAWGAQHNTKGKV---RMLADPSGNFIKAL 534
+ +S+N + A W A G+V ++ P GNF K L
Sbjct: 889 AVYRLSLN-ASLPAPWQAVSPGDGEVPSFQVYRAPFGNFTKKL 930
>AL117236-1|CAB55303.1| 594|Homo sapiens hypothetical protein
protein.
Length = 594
Score = 33.1 bits (72), Expect = 1.2
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Frame = +1
Query: 235 LPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKLKSDGVA 414
+ + LF++ P + N + KK VP A P + PG V K+KS G
Sbjct: 445 ITCSGLFQEKPHSLQNNIRTSLEKKRRGSGVPWASRPEATLQDFPGTVY-ISKVKSQGHP 503
Query: 415 EIVCVSVNDPYVMAAWGAQHNTKGKV---RMLADPSGNFIKAL 534
+ +S+N + A W A G+V ++ P GNF K L
Sbjct: 504 AVYRLSLN-ASLPAPWQAVSPGDGEVPSFQVYRAPFGNFTKKL 545
>AL031735-1|CAI22474.1| 1438|Homo sapiens patched domain containing 2
protein.
Length = 1438
Score = 33.1 bits (72), Expect = 1.2
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Frame = +1
Query: 235 LPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKLKSDGVA 414
+ + LF++ P + N + KK VP A P + PG V K+KS G
Sbjct: 830 ITCSGLFQEKPHSLQNNIRTSLEKKRRGSGVPWASRPEATLQDFPGTVY-ISKVKSQGHP 888
Query: 415 EIVCVSVNDPYVMAAWGAQHNTKGKV---RMLADPSGNFIKAL 534
+ +S+N + A W A G+V ++ P GNF K L
Sbjct: 889 AVYRLSLN-ASLPAPWQAVSPGDGEVPSFQVYRAPFGNFTKKL 930
>AB037758-1|BAA92575.1| 1438|Homo sapiens KIAA1337 protein protein.
Length = 1438
Score = 33.1 bits (72), Expect = 1.2
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Frame = +1
Query: 235 LPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKLKSDGVA 414
+ + LF++ P + N + KK VP A P + PG V K+KS G
Sbjct: 830 ITCSGLFQEKPHSLQNNIRTSLEKKRRGSGVPWASRPEATLQDFPGTVY-ISKVKSQGHP 888
Query: 415 EIVCVSVNDPYVMAAWGAQHNTKGKV---RMLADPSGNFIKAL 534
+ +S+N + A W A G+V ++ P GNF K L
Sbjct: 889 AVYRLSLN-ASLPAPWQAVSPGDGEVPSFQVYRAPFGNFTKKL 930
>AB095941-1|BAC23117.1| 648|Homo sapiens KIAA2021 protein protein.
Length = 648
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 489 GAYASRSQRQLHQGSGPGHQSAAARRFP 572
G++ SR+ R+ H G GP RRFP
Sbjct: 1 GSFCSRTGREAHMGQGPRSPHKVGRRFP 28
>AL137077-5|CAI11048.1| 223|Homo sapiens LSM14 homolog B (SCD6, S.
cerevisiae) protein.
Length = 223
Score = 30.3 bits (65), Expect = 8.5
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Frame = -2
Query: 659 REQDRPVPSGSTFRS*TLLSTMTMENLLERKPPSGGRLVPRSRALMKLPLGSASIRTFPL 480
R DRP P + ++++ +PP +P+ A+++ LGSAS F
Sbjct: 51 RPTDRPAPPREEIYEYIIFRGSDIKDITVCEPPKAQHTLPQDPAIVQSSLGSASASPFQP 110
Query: 479 VLC*AP-QAAITYGSLTDTHTISAT-PSDFSLSA-FCTYP-GKCVLEHPGVKAPGTANN 315
+ +P + YG L + +S + L A F + P GK + V+ G+A+N
Sbjct: 111 HVPYSPFRGMAPYGPLAASSLLSQQYAASLGLGAGFPSIPVGKSPMVEQAVQT-GSADN 168
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,554,223
Number of Sequences: 237096
Number of extensions: 2692236
Number of successful extensions: 9288
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 9006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9276
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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