Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_O16
         (692 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    26   0.98 
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           26   0.98 
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           26   0.98 
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    26   0.98 
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   2.3  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           25   3.0  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           25   3.0  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           25   3.0  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   4.0  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           23   6.9  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   6.9  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 26.2 bits (55), Expect = 0.98
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 530 EMRRGSFRAENGLVRRRRRTVSENDNISKKNN 625
           E  R +  A++ L+R  R TVS+N N+S   +
Sbjct: 318 EAERNARNAQHLLLRANRLTVSDNHNLSNSGS 349


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 26.2 bits (55), Expect = 0.98
 Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
 Frame = -3

Query: 528 AASTMRMFTLYS*QWLSCP---AVRYVRFWMLLTEHVITTLGPVSWRITSSATNLFPLCD 358
           A +T+R  T  +  W++     A    RF    T    TT  P  W   +  T      D
Sbjct: 104 ATTTLRPTTTTT-DWITTTTTEATTTTRFPTTTTTSAPTT--PSQWTDPTITTTTPVWTD 160

Query: 357 SSNISNPFATPVF-DAPPPPATMT 289
            +  S P  T  + D PPPP T T
Sbjct: 161 PTTWSAPTTTTTWSDQPPPPTTTT 184


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 26.2 bits (55), Expect = 0.98
 Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
 Frame = -3

Query: 528 AASTMRMFTLYS*QWLSCP---AVRYVRFWMLLTEHVITTLGPVSWRITSSATNLFPLCD 358
           A +T+R  T  +  W++     A    RF    T    TT  P  W   +  T      D
Sbjct: 104 ATTTLRPTTTTT-DWITTTTTEATTTTRFPTTTTTSAPTT--PSQWTDPTITTTTPVWTD 160

Query: 357 SSNISNPFATPVF-DAPPPPATMT 289
            +  S P  T  + D PPPP T T
Sbjct: 161 PTTWSAPTTTTTWSDQPPPPTTTT 184


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 26.2 bits (55), Expect = 0.98
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
 Frame = -3

Query: 522 STMRMFTLYS*QWLSCP---AVRYVRFWMLLTEHVITTLGPVSWRITSSATNLFPLCDSS 352
           +T+R  T  +  W++     A    +F    T    TT  P  W   +  T      D +
Sbjct: 106 TTLRPTTTTTTDWITTTTTEATTTTKFPTTTTTSAPTT--PSQWTDPTITTTTPVWTDPT 163

Query: 351 NISNPFATPVF-DAPPPPATMT 289
             S P  T  + D PPPP T T
Sbjct: 164 TWSAPTTTTTWSDQPPPPTTTT 185


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 4/38 (10%)
 Frame = -1

Query: 518 PCGCSPCTADS-GSL--VPL*DTSGSGCSLR-NTSSRH 417
           P GC PC  D  GSL   P  D     CS + N   RH
Sbjct: 438 PHGCQPCNCDERGSLDNTPSCDPVTGVCSCKENVEGRH 475


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
 Frame = -3

Query: 522 STMRMFTLYS*QWLSCP---AVRYVRFWMLLTEHVITTLGPVSWRITSSATNLFPLCDSS 352
           +T+R  T  +  W++     A     F    T    TT  P  W   +  T      D +
Sbjct: 106 TTLRPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTT--PSQWTDPTITTTTPIWTDPT 163

Query: 351 NISNPFATPVF-DAPPPPATMT 289
             S P  T  + D PPPP T T
Sbjct: 164 TWSAPTTTTTWSDQPPPPTTTT 185


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
 Frame = -3

Query: 522 STMRMFTLYS*QWLSCP---AVRYVRFWMLLTEHVITTLGPVSWRITSSATNLFPLCDSS 352
           +T+R  T  +  W++     A     F    T    TT  P  W   +  T      D +
Sbjct: 106 TTLRPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTT--PSQWTDPTITTTTPIWTDPT 163

Query: 351 NISNPFATPVF-DAPPPPATMT 289
             S P  T  + D PPPP T T
Sbjct: 164 TWSAPTTTTTWSDQPPPPTTTT 185


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
 Frame = -3

Query: 522 STMRMFTLYS*QWLSCP---AVRYVRFWMLLTEHVITTLGPVSWRITSSATNLFPLCDSS 352
           +T+R  T  +  W++     A     F    T    TT  P  W   +  T      D +
Sbjct: 106 TTLRPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTT--PSQWTDPTITTTTPIWTDPT 163

Query: 351 NISNPFATPVF-DAPPPPATMT 289
             S P  T  + D PPPP T T
Sbjct: 164 TWSAPTTTTTWSDQPPPPTTTT 185


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 12/36 (33%), Positives = 13/36 (36%)
 Frame = -1

Query: 557 QPGNFLVSFQQHPPCGCSPCTADSGSLVPL*DTSGS 450
           +PG  L S   H  C C  C    G   P  D   S
Sbjct: 597 RPGGLLCSGPDHGRCVCGQCECREGWTGPACDCRAS 632


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -3

Query: 393 TSSATNLFPLCDSSNISNPFATPVFDAPPPPATMTCRFVKVWS 265
           T++   + P   ++    P  T   D PPPP T T     VW+
Sbjct: 217 TTTTVWIDPTATTTTHVPPTTTTWSDLPPPPPTTTT--TTVWT 257


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -1

Query: 602  HFQRPSVSSASQAHSQPGNFLVSFQQ 525
            H QRPS+ S       PG F  S QQ
Sbjct: 2991 HQQRPSLISMLTGVQPPGGFPGSLQQ 3016


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,651
Number of Sequences: 2352
Number of extensions: 14387
Number of successful extensions: 48
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)