Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_O12
(697 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050029-1|AAH50029.1| 639|Homo sapiens PARN protein protein. 150 5e-36
AJ005698-1|CAA06683.1| 639|Homo sapiens poly(A)-specific ribonu... 150 5e-36
AL139045-1|CAM27947.1| 531|Homo sapiens poly(A)-specific ribonu... 101 2e-21
AK093139-1|BAC04070.1| 531|Homo sapiens protein ( Homo sapiens ... 101 2e-21
BC112246-1|AAI12247.1| 520|Homo sapiens poly(A)-specific ribonu... 83 7e-16
AL139045-2|CAI19750.2| 520|Homo sapiens poly(A)-specific ribonu... 83 7e-16
AK097559-1|BAC05101.1| 520|Homo sapiens protein ( Homo sapiens ... 83 7e-16
CR457320-1|CAG33601.1| 510|Homo sapiens TOE1 protein. 52 3e-06
BC009364-1|AAH09364.1| 510|Homo sapiens target of EGR1, member ... 52 3e-06
AY169960-1|AAN75441.1| 510|Homo sapiens target of Egr1 protein ... 52 3e-06
AL359540-11|CAI21722.1| 510|Homo sapiens target of EGR1, member... 52 3e-06
AK024011-1|BAB14774.1| 510|Homo sapiens protein ( Homo sapiens ... 52 3e-06
AF053318-1|AAD02685.1| 292|Homo sapiens CCR4-associated factor ... 35 0.32
BT006857-1|AAP35503.1| 292|Homo sapiens CCR4-NOT transcription ... 34 0.42
BC017366-1|AAH17366.1| 292|Homo sapiens CNOT8 protein protein. 34 0.42
AK025358-1|BAB15119.1| 292|Homo sapiens protein ( Homo sapiens ... 34 0.42
AF180476-1|AAF29830.1| 292|Homo sapiens CALIFp protein. 34 0.42
BT006685-1|AAP35331.1| 246|Homo sapiens CCR4-NOT transcription ... 32 1.7
BC070187-1|AAH70187.1| 285|Homo sapiens CCR4-NOT transcription ... 32 1.7
BC060852-1|AAH60852.1| 285|Homo sapiens CCR4-NOT transcription ... 32 1.7
BC007315-1|AAH07315.1| 246|Homo sapiens CNOT7 protein protein. 32 1.7
AF087844-1|AAP97157.1| 292|Homo sapiens CAF2 protein. 32 1.7
AF086915-1|AAP97145.1| 285|Homo sapiens CAF1 protein. 32 1.7
BC021706-1|AAH21706.1| 423|Homo sapiens heat shock transcriptio... 30 9.1
AF139982-1|AAD45880.1| 423|Homo sapiens LW-1 protein. 30 9.1
AF139980-1|AAD45879.1| 423|Homo sapiens LW-1 protein. 30 9.1
>BC050029-1|AAH50029.1| 639|Homo sapiens PARN protein protein.
Length = 639
Score = 150 bits (363), Expect = 5e-36
Identities = 77/191 (40%), Positives = 118/191 (61%), Gaps = 17/191 (8%)
Frame = +2
Query: 161 EVIRKNFKEALPLVAASVKKADFLVIDTEFTGIINGRDVSM----FDTPEEYYKCTQKGS 328
E+IR NFK L V ++++ADF ID EF+GI +G VS FDTPEE Y+ +K S
Sbjct: 2 EIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVSALTNGFDTPEERYQKLKKHS 61
Query: 329 SEFLLIQFGLCAFHWNHKEKHYMNDAYNFYLFPR--GSPGPDRMFMCQSSSLDFLASQGF 502
+FLL QFGLC F +++ + Y+ ++NFY+FP+ PD F+CQSSS+DFLASQGF
Sbjct: 62 MDFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQGF 121
Query: 503 DFNKLIKDGISYMTVPIECKLRENLTERQK--------TY---SKGKDSIKVPDEHKVYV 649
DFNK+ ++GI Y+ E +LRE E++ +Y + K + +P++ K ++
Sbjct: 122 DFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGAGALSYVSPNTSKCPVTIPEDQKKFI 181
Query: 650 EDICNQVQQFL 682
+ + +++ L
Sbjct: 182 DQVVEKIEDLL 192
>AJ005698-1|CAA06683.1| 639|Homo sapiens poly(A)-specific
ribonuclease protein.
Length = 639
Score = 150 bits (363), Expect = 5e-36
Identities = 77/191 (40%), Positives = 118/191 (61%), Gaps = 17/191 (8%)
Frame = +2
Query: 161 EVIRKNFKEALPLVAASVKKADFLVIDTEFTGIINGRDVSM----FDTPEEYYKCTQKGS 328
E+IR NFK L V ++++ADF ID EF+GI +G VS FDTPEE Y+ +K S
Sbjct: 2 EIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVSALTNGFDTPEERYQKLKKHS 61
Query: 329 SEFLLIQFGLCAFHWNHKEKHYMNDAYNFYLFPR--GSPGPDRMFMCQSSSLDFLASQGF 502
+FLL QFGLC F +++ + Y+ ++NFY+FP+ PD F+CQSSS+DFLASQGF
Sbjct: 62 MDFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQGF 121
Query: 503 DFNKLIKDGISYMTVPIECKLRENLTERQK--------TY---SKGKDSIKVPDEHKVYV 649
DFNK+ ++GI Y+ E +LRE E++ +Y + K + +P++ K ++
Sbjct: 122 DFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGAGALSYVSPNTSKCPVTIPEDQKKFI 181
Query: 650 EDICNQVQQFL 682
+ + +++ L
Sbjct: 182 DQVVEKIEDLL 192
>AL139045-1|CAM27947.1| 531|Homo sapiens poly(A)-specific
ribonuclease (PARN)-like domain containing 1 protein.
Length = 531
Score = 101 bits (242), Expect = 2e-21
Identities = 62/156 (39%), Positives = 92/156 (58%), Gaps = 7/156 (4%)
Frame = +2
Query: 179 FKEALPLVAASVKKADFLVIDTEFTGI---ING-RDVSMFDTPEEYYKCTQKGSSEFLLI 346
F+E+LPL+ V++ADF+ +D EFTG+ ++G + +S+FD P E+Y T++ +F +
Sbjct: 8 FEESLPLLQELVQEADFVGLDIEFTGLRSNLSGPQQISLFDLPSEWYLKTRQSVQQFTVC 67
Query: 347 QFGLCAFHWNHKEKH-YMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNKLIK 523
Q GL F E + Y+ + NFYLFP D F Q+SS+ FL GF++NK +K
Sbjct: 68 QIGLSVFSAIEGEANKYIAHSCNFYLFPTTFGILDSEFSFQASSVQFLNQYGFNYNKFLK 127
Query: 524 DGISYMTVPIECKLREN-LTERQKTYSK-GKDSIKV 625
+GI YM E K+R + LT + S KD IKV
Sbjct: 128 NGIPYMNEEQEKKIRHDILTGNWRVRSSPDKDQIKV 163
>AK093139-1|BAC04070.1| 531|Homo sapiens protein ( Homo sapiens
cDNA FLJ35820 fis, clone TESTI2006212, weakly similar to
Poly(A)-specific ribonuclease (deadenylation nuclease).
).
Length = 531
Score = 101 bits (242), Expect = 2e-21
Identities = 62/156 (39%), Positives = 92/156 (58%), Gaps = 7/156 (4%)
Frame = +2
Query: 179 FKEALPLVAASVKKADFLVIDTEFTGI---ING-RDVSMFDTPEEYYKCTQKGSSEFLLI 346
F+E+LPL+ V++ADF+ +D EFTG+ ++G + +S+FD P E+Y T++ +F +
Sbjct: 8 FEESLPLLQELVQEADFVGLDIEFTGLRSNLSGPQQISLFDLPSEWYLKTRQSVQQFTVC 67
Query: 347 QFGLCAFHWNHKEKH-YMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNKLIK 523
Q GL F E + Y+ + NFYLFP D F Q+SS+ FL GF++NK +K
Sbjct: 68 QIGLSVFSAIEGEANKYIAHSCNFYLFPTTFGILDSEFSFQASSVQFLNQYGFNYNKFLK 127
Query: 524 DGISYMTVPIECKLREN-LTERQKTYSK-GKDSIKV 625
+GI YM E K+R + LT + S KD IKV
Sbjct: 128 NGIPYMNEEQEKKIRHDILTGNWRVRSSPDKDQIKV 163
>BC112246-1|AAI12247.1| 520|Homo sapiens poly(A)-specific
ribonuclease (PARN)-like domain containing 1 protein.
Length = 520
Score = 83.4 bits (197), Expect = 7e-16
Identities = 53/137 (38%), Positives = 77/137 (56%), Gaps = 7/137 (5%)
Frame = +2
Query: 236 IDTEFTGI---ING-RDVSMFDTPEEYYKCTQKGSSEFLLIQFGLCAFHWNHKEKH-YMN 400
+D EFTG+ ++G + +S+FD P E+Y T++ +F + Q GL F E + Y+
Sbjct: 16 LDIEFTGLRSNLSGPQQISLFDLPSEWYLKTRQSVQQFTVCQIGLSVFSAIEGEANKYIA 75
Query: 401 DAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNKLIKDGISYMTVPIECKLREN-L 577
+ NFYLFP D F Q+SS+ FL GF++NK +K+GI YM E K+R + L
Sbjct: 76 HSCNFYLFPTTFGILDSEFSFQASSVQFLNQYGFNYNKFLKNGIPYMNEEQEKKIRHDIL 135
Query: 578 TERQKTYSK-GKDSIKV 625
T + S KD IKV
Sbjct: 136 TGNWRVRSSPDKDQIKV 152
>AL139045-2|CAI19750.2| 520|Homo sapiens poly(A)-specific
ribonuclease (PARN)-like domain containing 1 protein.
Length = 520
Score = 83.4 bits (197), Expect = 7e-16
Identities = 53/137 (38%), Positives = 77/137 (56%), Gaps = 7/137 (5%)
Frame = +2
Query: 236 IDTEFTGI---ING-RDVSMFDTPEEYYKCTQKGSSEFLLIQFGLCAFHWNHKEKH-YMN 400
+D EFTG+ ++G + +S+FD P E+Y T++ +F + Q GL F E + Y+
Sbjct: 16 LDIEFTGLRSNLSGPQQISLFDLPSEWYLKTRQSVQQFTVCQIGLSVFSAIEGEANKYIA 75
Query: 401 DAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNKLIKDGISYMTVPIECKLREN-L 577
+ NFYLFP D F Q+SS+ FL GF++NK +K+GI YM E K+R + L
Sbjct: 76 HSCNFYLFPTTFGILDSEFSFQASSVQFLNQYGFNYNKFLKNGIPYMNEEQEKKIRHDIL 135
Query: 578 TERQKTYSK-GKDSIKV 625
T + S KD IKV
Sbjct: 136 TGNWRVRSSPDKDQIKV 152
>AK097559-1|BAC05101.1| 520|Homo sapiens protein ( Homo sapiens
cDNA FLJ40240 fis, clone TESTI2023752. ).
Length = 520
Score = 83.4 bits (197), Expect = 7e-16
Identities = 53/137 (38%), Positives = 77/137 (56%), Gaps = 7/137 (5%)
Frame = +2
Query: 236 IDTEFTGI---ING-RDVSMFDTPEEYYKCTQKGSSEFLLIQFGLCAFHWNHKEKH-YMN 400
+D EFTG+ ++G + +S+FD P E+Y T++ +F + Q GL F E + Y+
Sbjct: 16 LDIEFTGLRSNLSGPQQISLFDLPSEWYLKTRQSVQQFTVCQIGLSVFSAIEGEANKYIA 75
Query: 401 DAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNKLIKDGISYMTVPIECKLREN-L 577
+ NFYLFP D F Q+SS+ FL GF++NK +K+GI YM E K+R + L
Sbjct: 76 HSCNFYLFPTTFGILDSEFSFQASSVQFLNQYGFNYNKFLKNGIPYMNEEQEKKIRHDIL 135
Query: 578 TERQKTYSK-GKDSIKV 625
T + S KD IKV
Sbjct: 136 TGNWRVRSSPDKDQIKV 152
>CR457320-1|CAG33601.1| 510|Homo sapiens TOE1 protein.
Length = 510
Score = 51.6 bits (118), Expect = 3e-06
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Frame = +2
Query: 161 EVIRKNFKEALPLVAASVKKADFLVIDTEFTGIINGRDVSMFDTPEEYYKCTQKGSSEFL 340
+V NFKE P + ++K A+F+ +DTE +G + R + EE YK +
Sbjct: 38 DVQSNNFKEMWPSLLLAIKTANFVAVDTELSG-LGDRKSLLNQCIEERYKAVCHAARTRS 96
Query: 341 LIQFGLCAF-HWNHKEKH-YMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNK 514
++ GL F K +H Y+ +N L ++ + S+ FL GF+FN+
Sbjct: 97 ILSLGLACFKRQPDKGEHSYLAQVFNLTLLCM------EEYVIEPKSVQFLIQHGFNFNQ 150
Query: 515 LIKDGISY 538
GI Y
Sbjct: 151 QYAQGIPY 158
>BC009364-1|AAH09364.1| 510|Homo sapiens target of EGR1, member 1
(nuclear) protein.
Length = 510
Score = 51.6 bits (118), Expect = 3e-06
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Frame = +2
Query: 161 EVIRKNFKEALPLVAASVKKADFLVIDTEFTGIINGRDVSMFDTPEEYYKCTQKGSSEFL 340
+V NFKE P + ++K A+F+ +DTE +G + R + EE YK +
Sbjct: 38 DVQSNNFKEMWPSLLLAIKTANFVAVDTELSG-LGDRKSLLNQCIEERYKAVCHAARTRS 96
Query: 341 LIQFGLCAF-HWNHKEKH-YMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNK 514
++ GL F K +H Y+ +N L ++ + S+ FL GF+FN+
Sbjct: 97 ILSLGLACFKRQPDKGEHSYLAQVFNLTLLCM------EEYVIEPKSVQFLIQHGFNFNQ 150
Query: 515 LIKDGISY 538
GI Y
Sbjct: 151 QYAQGIPY 158
>AY169960-1|AAN75441.1| 510|Homo sapiens target of Egr1 protein
protein.
Length = 510
Score = 51.6 bits (118), Expect = 3e-06
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Frame = +2
Query: 161 EVIRKNFKEALPLVAASVKKADFLVIDTEFTGIINGRDVSMFDTPEEYYKCTQKGSSEFL 340
+V NFKE P + ++K A+F+ +DTE +G + R + EE YK +
Sbjct: 38 DVQSNNFKEMWPSLLLAIKTANFVAVDTELSG-LGDRKSLLNQCIEERYKAVCHAARTRS 96
Query: 341 LIQFGLCAF-HWNHKEKH-YMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNK 514
++ GL F K +H Y+ +N L ++ + S+ FL GF+FN+
Sbjct: 97 ILSLGLACFKRQPDKGEHSYLAQVFNLTLLCM------EEYVIEPKSVQFLIQHGFNFNQ 150
Query: 515 LIKDGISY 538
GI Y
Sbjct: 151 QYAQGIPY 158
>AL359540-11|CAI21722.1| 510|Homo sapiens target of EGR1, member 1
(nuclear) protein.
Length = 510
Score = 51.6 bits (118), Expect = 3e-06
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Frame = +2
Query: 161 EVIRKNFKEALPLVAASVKKADFLVIDTEFTGIINGRDVSMFDTPEEYYKCTQKGSSEFL 340
+V NFKE P + ++K A+F+ +DTE +G + R + EE YK +
Sbjct: 38 DVQSNNFKEMWPSLLLAIKTANFVAVDTELSG-LGDRKSLLNQCIEERYKAVCHAARTRS 96
Query: 341 LIQFGLCAF-HWNHKEKH-YMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNK 514
++ GL F K +H Y+ +N L ++ + S+ FL GF+FN+
Sbjct: 97 ILSLGLACFKRQPDKGEHSYLAQVFNLTLLCM------EEYVIEPKSVQFLIQHGFNFNQ 150
Query: 515 LIKDGISY 538
GI Y
Sbjct: 151 QYAQGIPY 158
>AK024011-1|BAB14774.1| 510|Homo sapiens protein ( Homo sapiens
cDNA FLJ13949 fis, clone Y79AA1001041. ).
Length = 510
Score = 51.6 bits (118), Expect = 3e-06
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Frame = +2
Query: 161 EVIRKNFKEALPLVAASVKKADFLVIDTEFTGIINGRDVSMFDTPEEYYKCTQKGSSEFL 340
+V NFKE P + ++K A+F+ +DTE +G + R + EE YK +
Sbjct: 38 DVQSNNFKEMWPSLLLAIKTANFVAVDTELSG-LGDRKSLLNQCIEERYKAVCHAARTRS 96
Query: 341 LIQFGLCAF-HWNHKEKH-YMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNK 514
++ GL F K +H Y+ +N L ++ + S+ FL GF+FN+
Sbjct: 97 ILSLGLACFKRQPDKGEHSYLAQVFNLTLLCM------EEYVIEPKSVQFLIQHGFNFNQ 150
Query: 515 LIKDGISY 538
GI Y
Sbjct: 151 QYAQGIPY 158
>AF053318-1|AAD02685.1| 292|Homo sapiens CCR4-associated factor 1
protein.
Length = 292
Score = 34.7 bits (76), Expect = 0.32
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Frame = +2
Query: 161 EVIRKNFKEALPLVAASVKKADFLVIDTEFTGIINGRDVSMFDTPEEY-YKCTQKGSSEF 337
EV N +E + + V ++ +DTEF G++ R + F + +Y Y+ +
Sbjct: 14 EVWASNLEEEMRKIREIVPSYSYIAMDTEFPGVV-VRPIGEFRSSIDYQYQLLRCNVDLL 72
Query: 338 LLIQFGLCAFHWNHKEKHYMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNKL 517
+IQ GL + EK N + F + M+ S+D LA+ G F K
Sbjct: 73 KIIQLGLTFTN----EKGEYPSGINTWQFNFKFNLTEDMY--SQDSIDLLANSGLQFQKH 126
Query: 518 IKDGI 532
++GI
Sbjct: 127 EEEGI 131
>BT006857-1|AAP35503.1| 292|Homo sapiens CCR4-NOT transcription
complex, subunit 8 protein.
Length = 292
Score = 34.3 bits (75), Expect = 0.42
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Frame = +2
Query: 161 EVIRKNFKEALPLVAASVKKADFLVIDTEFTGIINGRDVSMFDTPEEY-YKCTQKGSSEF 337
EV N +E + + V ++ +DTEF G++ R + F + +Y Y+ +
Sbjct: 14 EVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVV-VRPIGEFRSSIDYQYQLLRCNVDLL 72
Query: 338 LLIQFGLCAFHWNHKEKHYMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNKL 517
+IQ GL + EK N + F + M+ S+D LA+ G F K
Sbjct: 73 KIIQLGLTFTN----EKGEYPSGINTWQFNFKFNLTEDMY--SQDSIDLLANSGLQFQKH 126
Query: 518 IKDGI 532
++GI
Sbjct: 127 EEEGI 131
>BC017366-1|AAH17366.1| 292|Homo sapiens CNOT8 protein protein.
Length = 292
Score = 34.3 bits (75), Expect = 0.42
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Frame = +2
Query: 161 EVIRKNFKEALPLVAASVKKADFLVIDTEFTGIINGRDVSMFDTPEEY-YKCTQKGSSEF 337
EV N +E + + V ++ +DTEF G++ R + F + +Y Y+ +
Sbjct: 14 EVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVV-VRPIGEFRSSIDYQYQLLRCNVDLL 72
Query: 338 LLIQFGLCAFHWNHKEKHYMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNKL 517
+IQ GL + EK N + F + M+ S+D LA+ G F K
Sbjct: 73 KIIQLGLTFTN----EKGEYPSGINTWQFNFKFNLTEDMY--SQDSIDLLANSGLQFQKH 126
Query: 518 IKDGI 532
++GI
Sbjct: 127 EEEGI 131
>AK025358-1|BAB15119.1| 292|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21705 fis, clone COL09940. ).
Length = 292
Score = 34.3 bits (75), Expect = 0.42
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Frame = +2
Query: 161 EVIRKNFKEALPLVAASVKKADFLVIDTEFTGIINGRDVSMFDTPEEY-YKCTQKGSSEF 337
EV N +E + + V ++ +DTEF G++ R + F + +Y Y+ +
Sbjct: 14 EVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVV-VRPIGEFRSSIDYQYQLLRCNVDLL 72
Query: 338 LLIQFGLCAFHWNHKEKHYMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNKL 517
+IQ GL + EK N + F + M+ S+D LA+ G F K
Sbjct: 73 KIIQLGLTFTN----EKGEYPSGINTWQFNFKFNLTEDMY--SQDSIDLLANSGLQFQKH 126
Query: 518 IKDGI 532
++GI
Sbjct: 127 EEEGI 131
>AF180476-1|AAF29830.1| 292|Homo sapiens CALIFp protein.
Length = 292
Score = 34.3 bits (75), Expect = 0.42
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Frame = +2
Query: 161 EVIRKNFKEALPLVAASVKKADFLVIDTEFTGIINGRDVSMFDTPEEY-YKCTQKGSSEF 337
EV N +E + + V ++ +DTEF G++ R + F + +Y Y+ +
Sbjct: 14 EVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVV-VRPIGEFRSSIDYQYQLLRCNVDLL 72
Query: 338 LLIQFGLCAFHWNHKEKHYMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNKL 517
+IQ GL + EK N + F + M+ S+D LA+ G F K
Sbjct: 73 KIIQLGLTFTN----EKGEYPSGINTWQFNFKFNLTEDMY--SQDSIDLLANSGLQFQKH 126
Query: 518 IKDGI 532
++GI
Sbjct: 127 EEEGI 131
>BT006685-1|AAP35331.1| 246|Homo sapiens CCR4-NOT transcription
complex, subunit 7 protein.
Length = 246
Score = 32.3 bits (70), Expect = 1.7
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Frame = +2
Query: 161 EVIRKNFKEALPLVAASVKKADFLVIDTEFTGIINGRDVSMFDTPEEY-YKCTQKGSSEF 337
EV N E + + ++K +++ +DTEF G++ R + F + +Y Y+ +
Sbjct: 14 EVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVV-ARPIGEFRSNADYQYQLLRCNVDLL 72
Query: 338 LLIQFGLCAFHWNHKEKHYMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNKL 517
+IQ GL + +++ Y + + + D M S++ L + G F K
Sbjct: 73 KIIQLGLT---FMNEQGEYPPGTSTWQFNFKFNLTED---MYAQDSIELLTTSGIQFKKH 126
Query: 518 IKDGI 532
++GI
Sbjct: 127 EEEGI 131
>BC070187-1|AAH70187.1| 285|Homo sapiens CCR4-NOT transcription
complex, subunit 7 protein.
Length = 285
Score = 32.3 bits (70), Expect = 1.7
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Frame = +2
Query: 161 EVIRKNFKEALPLVAASVKKADFLVIDTEFTGIINGRDVSMFDTPEEY-YKCTQKGSSEF 337
EV N E + + ++K +++ +DTEF G++ R + F + +Y Y+ +
Sbjct: 14 EVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVV-ARPIGEFRSNADYQYQLLRCNVDLL 72
Query: 338 LLIQFGLCAFHWNHKEKHYMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNKL 517
+IQ GL + +++ Y + + + D M S++ L + G F K
Sbjct: 73 KIIQLGLT---FMNEQGEYPPGTSTWQFNFKFNLTED---MYAQDSIELLTTSGIQFKKH 126
Query: 518 IKDGI 532
++GI
Sbjct: 127 EEEGI 131
>BC060852-1|AAH60852.1| 285|Homo sapiens CCR4-NOT transcription
complex, subunit 7 protein.
Length = 285
Score = 32.3 bits (70), Expect = 1.7
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Frame = +2
Query: 161 EVIRKNFKEALPLVAASVKKADFLVIDTEFTGIINGRDVSMFDTPEEY-YKCTQKGSSEF 337
EV N E + + ++K +++ +DTEF G++ R + F + +Y Y+ +
Sbjct: 14 EVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVV-ARPIGEFRSNADYQYQLLRCNVDLL 72
Query: 338 LLIQFGLCAFHWNHKEKHYMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNKL 517
+IQ GL + +++ Y + + + D M S++ L + G F K
Sbjct: 73 KIIQLGLT---FMNEQGEYPPGTSTWQFNFKFNLTED---MYAQDSIELLTTSGIQFKKH 126
Query: 518 IKDGI 532
++GI
Sbjct: 127 EEEGI 131
>BC007315-1|AAH07315.1| 246|Homo sapiens CNOT7 protein protein.
Length = 246
Score = 32.3 bits (70), Expect = 1.7
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Frame = +2
Query: 161 EVIRKNFKEALPLVAASVKKADFLVIDTEFTGIINGRDVSMFDTPEEY-YKCTQKGSSEF 337
EV N E + + ++K +++ +DTEF G++ R + F + +Y Y+ +
Sbjct: 14 EVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVV-ARPIGEFRSNADYQYQLLRCNVDLL 72
Query: 338 LLIQFGLCAFHWNHKEKHYMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNKL 517
+IQ GL + +++ Y + + + D M S++ L + G F K
Sbjct: 73 KIIQLGLT---FMNEQGEYPPGTSTWQFNFKFNLTED---MYAQDSIELLTTSGIQFKKH 126
Query: 518 IKDGI 532
++GI
Sbjct: 127 EEEGI 131
>AF087844-1|AAP97157.1| 292|Homo sapiens CAF2 protein.
Length = 292
Score = 32.3 bits (70), Expect = 1.7
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 1/125 (0%)
Frame = +2
Query: 161 EVIRKNFKEALPLVAASVKKADFLVIDTEFTGIINGRDVSMFDTPEEY-YKCTQKGSSEF 337
EV N +E + + V ++ +DTEF G++ R + F + +Y Y+ +
Sbjct: 14 EVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVV-VRPIGEFRSSIDYQYQLLRCNVDLL 72
Query: 338 LLIQFGLCAFHWNHKEKHYMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNKL 517
+IQ GL + EK N + F + M S+D LA+ G F K
Sbjct: 73 KIIQLGLTFTN----EKGEYPSGINTWQF--NCKLYLTVDMYSQDSIDLLANSGLQFQKH 126
Query: 518 IKDGI 532
++GI
Sbjct: 127 EEEGI 131
>AF086915-1|AAP97145.1| 285|Homo sapiens CAF1 protein.
Length = 285
Score = 32.3 bits (70), Expect = 1.7
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Frame = +2
Query: 161 EVIRKNFKEALPLVAASVKKADFLVIDTEFTGIINGRDVSMFDTPEEY-YKCTQKGSSEF 337
EV N E + + ++K +++ +DTEF G++ R + F + +Y Y+ +
Sbjct: 14 EVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVV-ARPIGEFRSNADYQYQLLRCNVDLL 72
Query: 338 LLIQFGLCAFHWNHKEKHYMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNKL 517
+IQ GL + +++ Y + + + D M S++ L + G F K
Sbjct: 73 KIIQLGLT---FMNEQGEYPPGTSTWQFNFKFNLTED---MYAQDSIELLTTSGIQFKKH 126
Query: 518 IKDGI 532
++GI
Sbjct: 127 EEEGI 131
>BC021706-1|AAH21706.1| 423|Homo sapiens heat shock transcription
factor family, X linked 1 protein.
Length = 423
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 199 KRQCLFEIFSYYFXLKRNVTVVNLEIXLIFYCN 101
+RQC F F+ F KR V+++N L FYC+
Sbjct: 165 RRQCTFRTFTRIFSAKRLVSILN---KLEFYCH 194
>AF139982-1|AAD45880.1| 423|Homo sapiens LW-1 protein.
Length = 423
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 199 KRQCLFEIFSYYFXLKRNVTVVNLEIXLIFYCN 101
+RQC F F+ F KR V+++N L FYC+
Sbjct: 165 RRQCTFRTFTRIFSAKRLVSILN---KLEFYCH 194
>AF139980-1|AAD45879.1| 423|Homo sapiens LW-1 protein.
Length = 423
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 199 KRQCLFEIFSYYFXLKRNVTVVNLEIXLIFYCN 101
+RQC F F+ F KR V+++N L FYC+
Sbjct: 165 RRQCTFRTFTRIFSAKRLVSILN---KLEFYCH 194
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,683,247
Number of Sequences: 237096
Number of extensions: 2080095
Number of successful extensions: 6705
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 6570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6683
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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