Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_O11
         (321 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          23   2.1  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    22   6.5  
AF043436-1|AAC05661.1|  263|Anopheles gambiae putative pupal-spe...    22   6.5  

>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 6   PSXFTTVTS*HCISSYMRALDYQHP 80
           PS +    + H IS  M+   YQHP
Sbjct: 315 PSRWIACDTLHAISKVMKECWYQHP 339


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 73  STLSHHPSPAFEEV 114
           ST+ HH +PA + V
Sbjct: 33  STIQHHAAPAIQHV 46


>AF043436-1|AAC05661.1|  263|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 263

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 73  STLSHHPSPAFEEV 114
           ST+ HH +PA + V
Sbjct: 33  STIQHHAAPAIQHV 46


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,829
Number of Sequences: 2352
Number of extensions: 2998
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 21613350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)