Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_O09
         (595 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78413-6|CAB01658.1|  144|Caenorhabditis elegans Hypothetical pr...   221   4e-58
Z93372-4|CAB07546.1|  301|Caenorhabditis elegans Hypothetical pr...    31   0.62 
U23525-10|AAC46571.2|  503|Caenorhabditis elegans Hypothetical p...    28   4.4  
U23525-9|ABC71820.1|  766|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z68341-1|CAA92764.1|  258|Caenorhabditis elegans Hypothetical pr...    28   5.8  
L11247-4|AAK84520.1|  392|Caenorhabditis elegans Hypothetical pr...    28   5.8  
U50193-2|AAA91248.1|  974|Caenorhabditis elegans Elongation fact...    27   7.6  
U41991-8|AAA83348.2|  500|Caenorhabditis elegans Hypothetical pr...    27   7.6  
M86958-1|AAA21824.1|  849|Caenorhabditis elegans eft-1 protein.        27   7.6  

>Z78413-6|CAB01658.1|  144|Caenorhabditis elegans Hypothetical
           protein T01C3.6 protein.
          Length = 144

 Score =  221 bits (539), Expect = 4e-58
 Identities = 97/140 (69%), Positives = 123/140 (87%)
 Frame = +1

Query: 61  IQAVQVFGRXXTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 240
           +Q+VQ FGR  TATAVA+CK+G G+++VNGRPL+ +EP++L+ KLQEP+LL+GKE+F  V
Sbjct: 5   VQSVQTFGRKKTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVGKERFQDV 64

Query: 241 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 420
           DIR+ V GGGHVAQ+YA+RQA++KAL+A+Y KYVDE SK+E+K+I   YD+SLLVADPRR
Sbjct: 65  DIRIRVSGGGHVAQIYAVRQALAKALVAYYHKYVDEQSKRELKNIFAAYDKSLLVADPRR 124

Query: 421 CEPKKFGGPGARARYQKSYR 480
            E KKFGGPGARARYQKSYR
Sbjct: 125 RESKKFGGPGARARYQKSYR 144


>Z93372-4|CAB07546.1|  301|Caenorhabditis elegans Hypothetical
           protein BE10.4 protein.
          Length = 301

 Score = 31.1 bits (67), Expect = 0.62
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 337 YVDEASKKEIKDILVQYDRSLLVADPRRCE 426
           + DE  +KE+ D+  QYDRS+ + D  R E
Sbjct: 151 FCDEVQQKEVGDLFHQYDRSIEIIDKVRHE 180


>U23525-10|AAC46571.2|  503|Caenorhabditis elegans Hypothetical
           protein K11G12.6a protein.
          Length = 503

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +3

Query: 210 FARQGKILYGRHQSDSQGWWSCSTSLRYQTSYFKGPDCLLSEICRRSL 353
           FAR    +Y       + WW+ S    Y  ++ KG D LL+ +    +
Sbjct: 399 FARAKLYMYHFTDIGDKNWWTRSFQEEYMPTFNKGNDALLNYLTEHKI 446


>U23525-9|ABC71820.1|  766|Caenorhabditis elegans Hypothetical
           protein K11G12.6b protein.
          Length = 766

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +3

Query: 210 FARQGKILYGRHQSDSQGWWSCSTSLRYQTSYFKGPDCLLSEICRRSL 353
           FAR    +Y       + WW+ S    Y  ++ KG D LL+ +    +
Sbjct: 662 FARAKLYMYHFTDIGDKNWWTRSFQEEYMPTFNKGNDALLNYLTEHKI 709


>Z68341-1|CAA92764.1|  258|Caenorhabditis elegans Hypothetical
           protein F01G4.2 protein.
          Length = 258

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 174 QTAAVQTSGTYPFARQGKILYGRHQSDSQG 263
           QT  V   GT+   R G  L G H+ D+ G
Sbjct: 113 QTIDVNVLGTFNVIRHGVALMGEHEKDANG 142


>L11247-4|AAK84520.1|  392|Caenorhabditis elegans Hypothetical
           protein F09G8.3 protein.
          Length = 392

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 397 LLVADPRRCEPKKFGGPGARARY 465
           LL  DPR+ E  K   PGARA++
Sbjct: 365 LLTLDPRKNERSKVNQPGARAKW 387


>U50193-2|AAA91248.1|  974|Caenorhabditis elegans Elongation factor
           protein 1 protein.
          Length = 974

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = -2

Query: 270 TTTLDCHSDVDHREFFLAEQKD-RF--LKFVLQQSG 172
           TT LDC  +  H EF+ AE  D RF  + F+ +Q G
Sbjct: 146 TTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRG 181


>U41991-8|AAA83348.2|  500|Caenorhabditis elegans Hypothetical
           protein C42D4.2 protein.
          Length = 500

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 14/56 (25%), Positives = 28/56 (50%)
 Frame = +1

Query: 265 GGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPK 432
           GG VA + +    ++  L + +Q+Y+  +S      + +Q +R+   A+   C PK
Sbjct: 129 GGTVASMLSFSTKVNTDL-SLFQQYISMSSPTNFDTLELQVERTYRFAEHANCLPK 183


>M86958-1|AAA21824.1|  849|Caenorhabditis elegans eft-1 protein.
          Length = 849

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = -2

Query: 270 TTTLDCHSDVDHREFFLAEQKD-RF--LKFVLQQSG 172
           TT LDC  +  H EF+ AE  D RF  + F+ +Q G
Sbjct: 21  TTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRG 56


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,862,630
Number of Sequences: 27780
Number of extensions: 283904
Number of successful extensions: 717
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)