Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_O08
(721 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces p... 35 0.013
SPAC17G8.06c |||dihydroxy-acid dehydratase|Schizosaccharomyces p... 29 0.88
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 28 1.2
SPAC10F6.13c |||aspartate aminotransferase |Schizosaccharomyces ... 28 1.5
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 27 3.6
SPBC8D2.06 |||isoleucine-tRNA ligase |Schizosaccharomyces pombe|... 26 4.7
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 26 4.7
SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyce... 26 6.2
SPAC2C4.14c |ppk11||PAK-related kinase Ppk11|Schizosaccharomyces... 26 6.2
SPAC3A12.15 |vps53||GARP complex subunit Vps53 |Schizosaccharomy... 26 6.2
SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces ... 25 8.2
>SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 749
Score = 34.7 bits (76), Expect = 0.013
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 526 ILNAKREETKAMESQ--RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPEDKLTIFCE 690
ILN +E KAMES RA+R F D L +EA+ +PED +++FC+
Sbjct: 629 ILNVWPDEKKAMESHSTRAHRRSTESKISFDS--EADSLFEEASKSVPEDPVSVFCD 683
>SPAC17G8.06c |||dihydroxy-acid dehydratase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 598
Score = 28.7 bits (61), Expect = 0.88
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 313 MWTINNFSFCREEMGEVLK-SSTFSAGASDKLKWC 414
M+T N + C E MG L SS++ AG+ +K C
Sbjct: 235 MYTANTMASCAEAMGMTLPGSSSYLAGSPEKFAEC 269
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 28.3 bits (60), Expect = 1.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 203 VTFWKIGLYERIMALARYNQQTARS 277
+TFWK+ LY+ + L RY + +R+
Sbjct: 978 LTFWKLSLYDVFVPLERYEFERSRA 1002
>SPAC10F6.13c |||aspartate aminotransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 409
Score = 27.9 bits (59), Expect = 1.5
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +1
Query: 289 VKVVKFSYMWTINNFSFCREEMGEVLKSSTFSAGASDKLKWCLRVNPKGLDEESKDYLSL 468
V V + Y W N SF E M +KS+ G+ L C NP G+D + +LS+
Sbjct: 150 VTVDTYPY-WDAKNRSFDYEGMLSTIKSAP--EGSIFLLHACAH-NPTGIDPTREQWLSI 205
Query: 469 YLLLVS 486
+ L+S
Sbjct: 206 FESLLS 211
>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1260
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 325 NNFSFCREEMGEVLKSSTFSAGASDKLKW-CLRVNPKG 435
N F E+MG+VL+ + S ++L + C +P G
Sbjct: 739 NRFMSISEQMGQVLQKTAVSVNVKERLDYSCALFSPDG 776
>SPBC8D2.06 |||isoleucine-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1064
Score = 26.2 bits (55), Expect = 4.7
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +1
Query: 436 LDEESKDYLSLYLLLVSCNKSEVRAKF-KFSILNAKREETKAMESQ-RAYRFVQGKDWGF 609
+++ D L LYL+ N VRA+ KF + T+ + +Y+F + + +
Sbjct: 612 IEKYGSDALRLYLI----NSPVVRAEILKFKEDGVREVVTRVLIPWWNSYKFFEAQAALY 667
Query: 610 KKFIRRDFLLDEA 648
KK +DF+ D+A
Sbjct: 668 KKVTGKDFVFDDA 680
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 26.2 bits (55), Expect = 4.7
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = -3
Query: 416 RHHFNLSLAPAEKVDDFNTSPISSLQK-LKLFIVHM*LNFTTLTSTKRSARFADYTWLRP 240
+++ N SL+P + + F TSP ++ Q+ F+ + N T+ + F D +
Sbjct: 185 KNNANKSLSPQDSISIFGTSPFNAYQQNTDNFVCWLFDNMEKDAPTESVSNFTDGINAKQ 244
Query: 239 LFVRIIQFSKMSPLLSTH 186
L + + S LS+H
Sbjct: 245 LNLMPVLDSPTIDFLSSH 262
>SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 413
Score = 25.8 bits (54), Expect = 6.2
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -3
Query: 701 TTDTSQNIVSLSSGNKPLASSSRKSLLINFLNPQSFPCTNL 579
TTD+S VS S ASSS S ++ +P S T L
Sbjct: 157 TTDSSSTDVSSSDSVSTSASSSNASNTVSVTSPASSSATPL 197
>SPAC2C4.14c |ppk11||PAK-related kinase Ppk11|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 312
Score = 25.8 bits (54), Expect = 6.2
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 364 LKSSTFSAGASDKLKWCLRVNPKGLDEESKDYLSLYLLLVS-CNKSEVR 507
L+ S FS D + CL+ NPK D + +YLS + + C + V+
Sbjct: 222 LERSKFSRAFCDFVSNCLKKNPK--DRATAEYLSKHKFIKKYCPNTSVK 268
>SPAC3A12.15 |vps53||GARP complex subunit Vps53 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 756
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -3
Query: 419 RRHHFNLSLAPAEKVDDFNTSPISSLQKL 333
++ + + L+ EK+DD N+S +S LQ+L
Sbjct: 60 KKTYEDAKLSMGEKMDDLNSSIVSLLQEL 88
>SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1213
Score = 25.4 bits (53), Expect = 8.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 554 LVSSLLAFNIENLNFARTSDLLHETNNKYNDK 459
++ S+ F+IE R +D LHE+N ND+
Sbjct: 203 VIESICKFSIETF---RLTDRLHESNRHINDQ 231
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,798,011
Number of Sequences: 5004
Number of extensions: 54218
Number of successful extensions: 157
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 337208592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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