Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_O08
         (721 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   5.1  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   5.1  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    22   6.7  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    22   6.7  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   6.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   8.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   8.9  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -3

Query: 434 PFGLTRRHHFNLSLAPAEKVDDFNTSPISSLQKLKLFI 321
           P+ +  R  ++ S   + +  DF T+P  S+++  LF+
Sbjct: 336 PYYMYSREQYSQSHLISNENRDFQTTPTVSVEQPHLFL 373


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -3

Query: 68  VERSGVVRAVRSTNDGRL-PSAG 3
           V  S +V AVRS   G+L PSAG
Sbjct: 392 VSMSALVSAVRSPAGGQLPPSAG 414


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 554 LVSSLLAFNIENLNFARTSDLLHETNNKYNDK 459
           ++SSL    I N N+    +  +  NN YN K
Sbjct: 80  IISSLSNNTIHNNNYKYNYNNNNYNNNNYNKK 111


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 554 LVSSLLAFNIENLNFARTSDLLHETNNKYNDK 459
           ++SSL    I N N+    +  +  NN YN K
Sbjct: 80  IISSLSNNTIHNNNYKYNYNNNNYNNNNYNKK 111


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 644 SSSRKSLLINFLNPQSFPCTNLYARCDSIAL 552
           S +  S   +FL+  S    N+Y +CD   L
Sbjct: 83  SQNSASTYNSFLSSDSASSGNVYCKCDDCLL 113


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 5/15 (33%), Positives = 13/15 (86%)
 Frame = +1

Query: 211 LENWIIRTNNGLSQV 255
           ++NW++  N+GL+++
Sbjct: 543 IDNWMLDLNSGLNKI 557


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 5/15 (33%), Positives = 13/15 (86%)
 Frame = +1

Query: 211 LENWIIRTNNGLSQV 255
           ++NW++  N+GL+++
Sbjct: 543 IDNWMLDLNSGLNKI 557


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,968
Number of Sequences: 438
Number of extensions: 3611
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)