Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_O07
(709 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23139-5|AAN65330.1| 374|Caenorhabditis elegans Hypothetical pr... 94 1e-19
AL032637-12|CAA21614.1| 338|Caenorhabditis elegans Hypothetical... 86 2e-17
Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical pr... 31 0.61
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 30 1.9
X59156-9|CAB56747.1| 108|Caenorhabditis elegans transposase pro... 29 3.3
AF077536-11|AAK31413.1| 217|Caenorhabditis elegans Hypothetical... 28 5.7
Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF040655-8|AAB95047.1| 632|Caenorhabditis elegans Hypothetical ... 28 7.5
Z73427-7|CAA97799.1| 371|Caenorhabditis elegans Hypothetical pr... 27 9.9
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 27 9.9
>U23139-5|AAN65330.1| 374|Caenorhabditis elegans Hypothetical
protein F13H8.3 protein.
Length = 374
Score = 93.9 bits (223), Expect = 1e-19
Identities = 62/189 (32%), Positives = 102/189 (53%), Gaps = 12/189 (6%)
Frame = +3
Query: 126 KFVIDNDAGGDDAMAIFLAALFEKYHAGPQLIGVTTSNGNTNEDNVSYNNQRILKVAKRQ 305
K +ID D DD + +A + ++I +TT +G + + N R+L+ +
Sbjct: 24 KLIIDTDGVYDDIRGLTIALTNQNV----EVIAITTVHGGVTANQSAANVARLLRAIGKH 79
Query: 306 DVPIYRGSKSSLVKTPEI---TDYFGKDGLGDSGDVYPDLVP-----PHTENAVNALIHL 461
+VP++ G++ SLV I + FG DG+G DV P +P NAV+A+I+L
Sbjct: 80 NVPVFIGAQDSLVPKGPIQVWEELFGSDGIGGVPDVEPKTLPSDFNSAQVGNAVDAIINL 139
Query: 462 SKTHEGNLTIITIGALTNLALAIKTDPTFLGRLAHVYIGAGHI----HTEEYPTAEFNAH 629
+K+ + ++ ++ +G LTN+A+AI+ DP R+ V I G+ +T+ TAEFN
Sbjct: 140 TKSTK-DIILVGLGPLTNIAMAIRKDPDISKRVKQVVIMGGNYLGVGNTQFNSTAEFNFL 198
Query: 630 MDVEAYHVV 656
MD EA H+V
Sbjct: 199 MDPEAAHIV 207
>AL032637-12|CAA21614.1| 338|Caenorhabditis elegans Hypothetical
protein Y43F8C.13 protein.
Length = 338
Score = 86.2 bits (204), Expect = 2e-17
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Frame = +3
Query: 120 KGKFVIDNDAGGDDAMAIFLAALFEKYHAGPQLIGVTTSNGNTNEDNVSYNNQRILKVAK 299
K K VID+D DD AI LA H +++ T +G D N +R ++
Sbjct: 5 KVKLVIDSDGVSDDVRAISLAL----QHPKAEILAFTAVHGCVTVDQACANIKRTIRAND 60
Query: 300 RQDVPIYRGSKSSLVKTPE---ITDYFGKDGLGDSGDVYPDLVPPHTE----NAVNALIH 458
R ++P+Y+G+ S++ P+ ++D+FG DG+GD + +P + E +A ALI
Sbjct: 61 RSNIPVYKGAAKSILSLPKDDTVSDFFGIDGIGDKPEEFPKVERSDFEGEGKHASLALID 120
Query: 459 LSKTHEGNLTIITIGALTNLALAIKTDPTFLGRLAHVYIGAGHIH----TEEYPTAEFNA 626
+ + + + T++TIG LTN+A+A++ F + + I G+ + + +AE+N
Sbjct: 121 ILRENR-DATLVTIGPLTNVAIALQLCEEFSTYPSRLVIMGGNYYAVGNVDGGSSAEYNF 179
Query: 627 HMDVEAYHVVTENANPXKVTIFPF 698
H D EA +V +TI P+
Sbjct: 180 HGDPEAASIVLRRMK-CPITIVPW 202
>Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical
protein R07E5.1 protein.
Length = 812
Score = 31.5 bits (68), Expect = 0.61
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 291 VAKRQDVPI-YRGSKSSLVKTPEITDYFGKDGLGDSGDVYPDLVPPHTENAVNALIHLSK 467
+AKR +VP Y GS + V + TD+ KD L D G V L P+T N + L K
Sbjct: 535 LAKRFNVPHPYPGSDTVGVPALQKTDWKRKDRLADIGGVSATLGLPNTANEIEMRERLLK 594
Query: 468 T 470
+
Sbjct: 595 S 595
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical
protein K03H1.2 protein.
Length = 1131
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 276 QRILKVAKRQDVPIYRGSKSSLVKTPEITDYFGKDGLGDSG 398
Q+++ V + +V I G S KT ++ Y +DG GDSG
Sbjct: 448 QKMMNVIRENNVVIIVGETGS-GKTTQLAQYLLEDGFGDSG 487
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex
determination protein MOG-1 protein.
Length = 1131
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 276 QRILKVAKRQDVPIYRGSKSSLVKTPEITDYFGKDGLGDSG 398
Q+++ V + +V I G S KT ++ Y +DG GDSG
Sbjct: 448 QKMMNVIRENNVVIIVGETGS-GKTTQLAQYLLEDGFGDSG 487
>X59156-9|CAB56747.1| 108|Caenorhabditis elegans transposase
protein.
Length = 108
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -3
Query: 452 KSIDGIFCMRRYQIWVDIPTVSEAVFTEVVRDFRGFHQRGFRTSINWHVL 303
++++ I R +W TV+ +FT + D +G +GF+ I W ++
Sbjct: 49 RAVEKIQTRRNRSVWCK--TVNLIIFTSICSDCQGASFKGFQYQILWKII 96
>AF077536-11|AAK31413.1| 217|Caenorhabditis elegans Hypothetical
protein C16A11.8 protein.
Length = 217
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 60 RYTLCSILMLSRYCECMSGIKGKFVIDND 146
R+ LCS+L+ C C+ +K F IDND
Sbjct: 3 RWILCSVLL----CFCIVNVKAVFNIDND 27
>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical
protein T08G11.1b protein.
Length = 3185
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/58 (32%), Positives = 23/58 (39%)
Frame = +2
Query: 62 LYAVLNFNVITLL*MYVRN*GEIRDRQ*RWWR*CYGHILGRSVREVSCRASINWSYDK 235
L A FN Y N E + WW+ Y IL VR R NWS+D+
Sbjct: 303 LEAQERFNAAGQYLKYRPNLNEFKGHYKAWWKFAYTSILEEKVR----RRRNNWSWDR 356
>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical
protein T08G11.1a protein.
Length = 3212
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/58 (32%), Positives = 23/58 (39%)
Frame = +2
Query: 62 LYAVLNFNVITLL*MYVRN*GEIRDRQ*RWWR*CYGHILGRSVREVSCRASINWSYDK 235
L A FN Y N E + WW+ Y IL VR R NWS+D+
Sbjct: 303 LEAQERFNAAGQYLKYRPNLNEFKGHYKAWWKFAYTSILEEKVR----RRRNNWSWDR 356
>AF040655-8|AAB95047.1| 632|Caenorhabditis elegans Hypothetical
protein T24E12.10 protein.
Length = 632
Score = 27.9 bits (59), Expect = 7.5
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Frame = +3
Query: 345 KTPEITDYFGKDGLGDSGD--VYPDLVPPHTE----NAVNALIHLSKTHEGNLTIITIGA 506
++PE+ DY +DG D D + P + T+ A +A +S +E +L + A
Sbjct: 464 QSPEVRDYVNEDG-HDFCDSLIKPKELSQSTKVREAQAEDAAPSVSPNYEASLA--SDEA 520
Query: 507 LTNLALAIKTDPTFLGRLAHVYIGAGHIHTEEYPTAEFNAHMDVEAYHVVTENANPXK 680
L + + ++ D F A T + P +++ +D EA+H+ T++ P K
Sbjct: 521 LCEIVVEVQEDRQFSSSPASHDAPIEQQETSQSPENQYD--IDEEAHHLSTQSVAPVK 576
>Z73427-7|CAA97799.1| 371|Caenorhabditis elegans Hypothetical
protein F58B3.7 protein.
Length = 371
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +3
Query: 354 EITDYFGKDGLGDSGDVYPDLVPPHTENAVNALIHLSKTHEGNLTIITIGALTNLALAIK 533
++++ G++G + D + + + VN ++H+ ++ E + + TN A AIK
Sbjct: 283 DLSEVSGEEGKKEFADEIKEEMEKCGQ-VVNVIVHVDESQEEDRQVRVFVEFTNNAQAIK 341
Query: 534 TDPTFLGR-LAHVYIGAGHIHTEEYPTAEF 620
GR + AG + +Y EF
Sbjct: 342 AFVMMNGRFFGGRSVSAGFQNVSDYNNREF 371
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 177 LAALFEKYHAGPQLIGVTTS--NGNTNEDNVSYNNQRILKVAKRQDVPIYRG 326
L L K Q+ V T+ NT+ ++Y+ V RQ VP+YRG
Sbjct: 1137 LLELAPKPEVAAQIRKVLTAAEKDNTDAHQLTYDEHNPFVVCSRQFVPLYRG 1188
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,387,800
Number of Sequences: 27780
Number of extensions: 311262
Number of successful extensions: 810
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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