Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_O03
         (407 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    27   0.20 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   3.2  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    23   5.7  

>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 27.5 bits (58), Expect = 0.20
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -2

Query: 193 SKTTWQLINQSKNYKPKNFISTIKVGNKFV 104
           +K  W+L NQ+  Y PKN I T+K G   V
Sbjct: 84  TKYVWRLPNQA--YHPKNTIKTLKHGGGHV 111


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +1

Query: 211 ILNEFCAFCVSFMIFF 258
           ++ +FC FC+ F ++F
Sbjct: 2   LVTQFCPFCLLFNLYF 17


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -2

Query: 202 VNKSKTTWQLINQSKNYKPKNFISTIKVGNKFV 104
           +N++K +W  + +    KPK  +     G K V
Sbjct: 208 MNETKGSWSTVVRKNRRKPKESVIPDNTGEKQV 240


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 290,280
Number of Sequences: 2352
Number of extensions: 4397
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32922351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)