Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_O03
(407 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 23 1.8
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 1.8
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 3.1
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 3.1
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 21 4.1
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 21 4.1
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 5.4
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.1
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 7.1
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 7.1
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 7.1
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 7.1
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 7.1
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 7.1
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 7.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 7.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 7.1
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 22.6 bits (46), Expect = 1.8
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 205 LFILNEFCAFCVSFMIFFNLLDLEYC 282
++++ FC C+ +F L L YC
Sbjct: 28 MYLVRAFCRNCIHPTVFSVLFWLGYC 53
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.6 bits (46), Expect = 1.8
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 205 LFILNEFCAFCVSFMIFFNLLDLEYC 282
++++ FC C+ +F L L YC
Sbjct: 476 MYLVRAFCRNCIHPTVFSVLFWLGYC 501
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.8 bits (44), Expect = 3.1
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = +1
Query: 232 FCVSFMIFFNLLDLEYCF 285
FC+ F++FF + + + F
Sbjct: 453 FCLLFLMFFECIAISWAF 470
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.8 bits (44), Expect = 3.1
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = +1
Query: 232 FCVSFMIFFNLLDLEYCF 285
FC+ F++FF + + + F
Sbjct: 506 FCLLFLMFFECIAISWAF 523
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.4 bits (43), Expect = 4.1
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = +3
Query: 183 VVFDLLTVIYIK*ILCFLCK 242
V+F ++ V+ ++CF+CK
Sbjct: 10 VLFVIINVLLHGQVICFVCK 29
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.4 bits (43), Expect = 4.1
Identities = 7/16 (43%), Positives = 7/16 (43%)
Frame = -1
Query: 98 PQAIANYFNNFSKMYW 51
P I NY F YW
Sbjct: 333 PDGIRNYLTKFVSEYW 348
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.0 bits (42), Expect = 5.4
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -1
Query: 83 NYFNNFSKMYWD 48
NY NN+ K+Y++
Sbjct: 343 NYNNNYKKLYYN 354
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 20.6 bits (41), Expect = 7.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 177 CQVVFDLLTVIYIK*ILC 230
C +VF L TV+ ILC
Sbjct: 436 CLIVFTLFTVLATIVILC 453
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 20.6 bits (41), Expect = 7.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 177 CQVVFDLLTVIYIK*ILC 230
C +VF L TV+ ILC
Sbjct: 436 CLIVFTLFTVLATIVILC 453
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 20.6 bits (41), Expect = 7.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 177 CQVVFDLLTVIYIK*ILC 230
C +VF L TV+ ILC
Sbjct: 436 CLIVFTLFTVLATIVILC 453
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 20.6 bits (41), Expect = 7.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 177 CQVVFDLLTVIYIK*ILC 230
C +VF L TV+ ILC
Sbjct: 436 CLIVFTLFTVLATIVILC 453
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 20.6 bits (41), Expect = 7.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 177 CQVVFDLLTVIYIK*ILC 230
C +VF L TV+ ILC
Sbjct: 436 CLIVFTLFTVLATIVILC 453
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 20.6 bits (41), Expect = 7.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 177 CQVVFDLLTVIYIK*ILC 230
C +VF L TV+ ILC
Sbjct: 436 CLIVFTLFTVLATIVILC 453
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 7.1
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -1
Query: 128 D*SRQQICDEPQAIANYFNNF 66
D + ++ C EP+ I++ NN+
Sbjct: 69 DRTERERCKEPKIISSLSNNY 89
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 7.1
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -1
Query: 128 D*SRQQICDEPQAIANYFNNF 66
D + ++ C EP+ I++ NN+
Sbjct: 69 DRTERERCKEPKIISSLSNNY 89
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 7.1
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -1
Query: 128 D*SRQQICDEPQAIANYFNNF 66
D + ++ C EP+ I++ NN+
Sbjct: 69 DRTERERCKEPKIISSLSNNY 89
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 7.1
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -1
Query: 128 D*SRQQICDEPQAIANYFNNF 66
D + ++ C EP+ I++ NN+
Sbjct: 69 DRTERERCKEPKIISSLSNNY 89
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 7.1
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -1
Query: 128 D*SRQQICDEPQAIANYFNNF 66
D + ++ C EP+ I++ NN+
Sbjct: 69 DRTERERCKEPKIISSLSNNY 89
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 7.1
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -1
Query: 128 D*SRQQICDEPQAIANYFNNF 66
D + ++ C EP+ I++ NN+
Sbjct: 69 DRTERERCKEPKIISSLSNNY 89
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 7.1
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -1
Query: 128 D*SRQQICDEPQAIANYFNNF 66
D + ++ C EP+ I++ NN+
Sbjct: 69 DRTERERCKEPKIISSLSNNY 89
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.6 bits (41), Expect = 7.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 177 CQVVFDLLTVIYIK*ILC 230
C +VF L TV+ ILC
Sbjct: 504 CLIVFTLFTVLATIVILC 521
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.6 bits (41), Expect = 7.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 177 CQVVFDLLTVIYIK*ILC 230
C +VF L TV+ ILC
Sbjct: 504 CLIVFTLFTVLATIVILC 521
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,764
Number of Sequences: 438
Number of extensions: 1334
Number of successful extensions: 22
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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