Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_O01
         (708 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AL032648-1|CAA21697.1|   99|Caenorhabditis elegans Hypothetical ...    30   1.9  

>Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical
           protein F42E11.1 protein.
          Length = 1266

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = -3

Query: 697 HIFLFYFLN*ICVLMYTLTNYVTGCFFTGASYG*TLVEDHVLQ 569
           H  L YFL  + VLM+T T +   C FT A      +  H+LQ
Sbjct: 95  HYCLLYFL--LGVLMFTCTYFSNACLFTMAERRLYCIRKHLLQ 135


>AL032648-1|CAA21697.1|   99|Caenorhabditis elegans Hypothetical
           protein Y54G9A.1 protein.
          Length = 99

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +2

Query: 98  NWSLSYVSGYFRILLCSETNFI*YLKCYLHPAYEQLSEGRSYF 226
           NW  S   G+F      ET+F+ Y++  +    E  SE  S+F
Sbjct: 41  NWVFSLKFGFFTNSFVLETDFVVYIEIQVTKKREHKSEAHSFF 83


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,343,126
Number of Sequences: 27780
Number of extensions: 309829
Number of successful extensions: 699
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)