Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_N24
         (570 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0211 + 15899017-15901392                                         29   2.0  
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008...    29   3.4  
01_06_1588 + 38474698-38477169                                         28   6.0  
11_01_0772 - 6455042-6458107                                           27   8.0  

>10_08_0211 + 15899017-15901392
          Length = 791

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/56 (25%), Positives = 24/56 (42%)
 Frame = +3

Query: 312 ESRSHRDKWRCRGYQCDSSLKKRKRGGTELPNTHFWSKFLNNFNFIHLDNYRPAMY 479
           +S  H  +W C+G+      ++ K         H W   +N + F+   NYRP  +
Sbjct: 395 DSFKHAPRWLCKGFLWLLCTRRSKI-------VHHWHNKVNQYEFLQSFNYRPCKW 443


>06_03_1075 +
           27399279-27399376,27399449-27399555,27400791-27400898,
           27401763-27401860,27401983-27402033,27402137-27402228,
           27402360-27402459,27402765-27402884,27402977-27403045,
           27403299-27403345,27403428-27403483,27404760-27404800,
           27405155-27405260,27406728-27406860,27406937-27407357
          Length = 548

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +3

Query: 336 WRCRGYQCDSSLKKRKRGGTELPNTHFWSKFLNNFNFIHLDNY 464
           WRCR     S    +   G   P   F+  FL+   F+H+ NY
Sbjct: 54  WRCRAGATGSGFDVK---GMSFPGYSFFLVFLSLHYFVHIQNY 93


>01_06_1588 + 38474698-38477169
          Length = 823

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +3

Query: 357 CDSSLKKRKRGGTELPNTHFWSKFLNNFNFIHLDNYRPA 473
           C     + + G   LP T FW   LN F+ I +D  + A
Sbjct: 334 CGGGGGRPEMGFARLPQTDFWGSDLNLFSSISVDGCKAA 372


>11_01_0772 - 6455042-6458107
          Length = 1021

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 14/67 (20%), Positives = 32/67 (47%)
 Frame = +1

Query: 190 ISTEKVVVKGYPLIKRDKDYVYVDPKLRVIKGIIARDLSRTKAEVTVTSGGVGATNVTLH 369
           IS  +     +P + +D+D V ++   + +K + +  +S  +       GG+G T + L+
Sbjct: 150 ISEHRFPQYSFPRLMKDEDLVGMENNRQHLKQLFSHGISALRVISVWGMGGMGKTTLVLN 209

Query: 370 LKSERGE 390
           +  +  E
Sbjct: 210 VYEQHKE 216


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,537,081
Number of Sequences: 37544
Number of extensions: 238415
Number of successful extensions: 428
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 428
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)