Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_N22
(416 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 57 6e-09
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 47 5e-06
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 33 0.063
Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical pr... 30 0.59
Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical pr... 30 0.59
Z74028-4|CAC70073.1| 143|Caenorhabditis elegans Hypothetical pr... 30 0.59
DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping... 30 0.59
AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical ... 30 0.59
AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical ... 30 0.59
U41276-3|AAA82470.2| 517|Caenorhabditis elegans Hypothetical pr... 30 0.78
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z77655-2|CAB01136.1| 156|Caenorhabditis elegans Hypothetical pr... 28 3.1
U00067-6|AAL08037.1| 167|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z82265-3|CAB05173.1| 471|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z81078-5|CAB03078.2| 722|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z75535-4|CAA99828.2| 722|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z83217-1|CAB05681.1| 376|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z81484-3|CAB03971.1| 346|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 27 7.2
U38377-5|AAP46283.1| 300|Caenorhabditis elegans Map kinase kina... 26 9.5
U38377-4|AAA79746.2| 347|Caenorhabditis elegans Map kinase kina... 26 9.5
AL021386-3|CAA16167.1| 330|Caenorhabditis elegans Hypothetical ... 26 9.5
AF125459-7|AAD12836.1| 971|Caenorhabditis elegans Hypothetical ... 26 9.5
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 56.8 bits (131), Expect = 6e-09
Identities = 22/37 (59%), Positives = 31/37 (83%)
Frame = +3
Query: 66 GARIVVHLCHALKKGEKGVASICNGGGGASSVMIEKM 176
GAR++ HL H LK G+ GVA+ICNGGGG+S ++I+K+
Sbjct: 371 GARLITHLVHTLKSGQIGVAAICNGGGGSSGMVIQKL 407
Score = 42.7 bits (96), Expect = 1e-04
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +2
Query: 2 DPSKINVHGGAVSLGHPIGMS 64
DPS +N HGGAVS+GHPIGMS
Sbjct: 350 DPSLVNPHGGAVSIGHPIGMS 370
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 47.2 bits (107), Expect = 5e-06
Identities = 17/37 (45%), Positives = 29/37 (78%)
Frame = +3
Query: 66 GARIVVHLCHALKKGEKGVASICNGGGGASSVMIEKM 176
GA ++ HL H L+ G+ GVA++C+G GG+S ++I+K+
Sbjct: 424 GASLITHLVHTLESGQIGVAALCDGDGGSSGMVIQKL 460
Score = 44.0 bits (99), Expect = 4e-05
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +2
Query: 2 DPSKINVHGGAVSLGHPIGMSWSS 73
DPS +N HGGAVS+GHPIGMS +S
Sbjct: 403 DPSLVNPHGGAVSIGHPIGMSGAS 426
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 45.6 bits (103), Expect = 1e-05
Identities = 20/37 (54%), Positives = 29/37 (78%)
Frame = +3
Query: 66 GARIVVHLCHALKKGEKGVASICNGGGGASSVMIEKM 176
G RIV L ++L G+ GVA+ICNGGG A++V+I+K+
Sbjct: 354 GLRIVNSLAYSLAPGQLGVAAICNGGGEATAVLIKKL 390
Score = 37.9 bits (84), Expect = 0.003
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +2
Query: 2 DPSKINVHGGAVSLGHPIGMS 64
+PS +NV GGAV++GHP+GMS
Sbjct: 333 EPSVVNVKGGAVAIGHPLGMS 353
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 33.5 bits (73), Expect = 0.063
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 54 LVCLGARIVVHLCHALKKG--EKGVASICNGGGGASSVMIEKM 176
L GARI H+ H L + + G+ S C GGG +++ EK+
Sbjct: 352 LAASGARISTHIVHELHRRNVKYGIGSACIGGGQGIAILFEKV 394
Score = 31.5 bits (68), Expect = 0.25
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +2
Query: 11 KINVHGGAVSLGHPIGMS 64
K+NV+GGA++LGHP+ S
Sbjct: 338 KLNVNGGAIALGHPLAAS 355
>Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 30.3 bits (65), Expect = 0.59
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 184 STYIFSIITDDAPPPPLQIEATPFSPFFK 98
S+ IFS + PPPP+ +ATP P +K
Sbjct: 400 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 428
>Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 30.3 bits (65), Expect = 0.59
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 184 STYIFSIITDDAPPPPLQIEATPFSPFFK 98
S+ IFS + PPPP+ +ATP P +K
Sbjct: 423 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 451
>Z74028-4|CAC70073.1| 143|Caenorhabditis elegans Hypothetical
protein C14C10.7 protein.
Length = 143
Score = 30.3 bits (65), Expect = 0.59
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 127 EATPFSPFFKAWHRCTTMRAPRH 59
E TP P FK +H C R P H
Sbjct: 78 ETTPIDPVFKIYHDCNDERLPTH 100
>DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping
protein protein.
Length = 770
Score = 30.3 bits (65), Expect = 0.59
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 184 STYIFSIITDDAPPPPLQIEATPFSPFFK 98
S+ IFS + PPPP+ +ATP P +K
Sbjct: 384 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 412
>AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 30.3 bits (65), Expect = 0.59
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 184 STYIFSIITDDAPPPPLQIEATPFSPFFK 98
S+ IFS + PPPP+ +ATP P +K
Sbjct: 400 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 428
>AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 30.3 bits (65), Expect = 0.59
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 184 STYIFSIITDDAPPPPLQIEATPFSPFFK 98
S+ IFS + PPPP+ +ATP P +K
Sbjct: 423 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 451
>U41276-3|AAA82470.2| 517|Caenorhabditis elegans Hypothetical
protein C52B11.3 protein.
Length = 517
Score = 29.9 bits (64), Expect = 0.78
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 332 HTLIHFQIFNFNLLTIYKNFFYLIPTLTKKYLKQCT 225
H L+ +F+ LLT+ N +I TKKYL+ T
Sbjct: 42 HPLLAIALFSICLLTVAGNCLVVIAVCTKKYLRNPT 77
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +3
Query: 66 GARIVVHLCHALK--KGEKGVASICNGGGGASSVMIE 170
G R+ H H LK KG+ V + C GG ++IE
Sbjct: 408 GVRLATHSAHRLKEEKGQYAVIAACAAGGHGVGMLIE 444
Score = 27.9 bits (59), Expect = 3.1
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2
Query: 11 KINVHGGAVSLGHPIG 58
K+N+ GG++S+GHP G
Sbjct: 390 KLNLWGGSLSIGHPFG 405
>Z77655-2|CAB01136.1| 156|Caenorhabditis elegans Hypothetical
protein C56A3.2 protein.
Length = 156
Score = 27.9 bits (59), Expect = 3.1
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 133 QIEATPFSPFFKAWHRCTTMRAPRH 59
+ E TP P FK +H C P H
Sbjct: 72 EAELTPIDPIFKVYHDCDDKYIPGH 96
>U00067-6|AAL08037.1| 167|Caenorhabditis elegans Hypothetical
protein F54E7.9 protein.
Length = 167
Score = 27.9 bits (59), Expect = 3.1
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -1
Query: 332 HTLIHFQIFNFNLLTIYKNFFYLIPTLTKKYLKQCT 225
H ++H Q N + YKN + + L +Y ++C+
Sbjct: 120 HAMLHVQTSNKTAIEFYKNRGFNVDCLVPQYYQRCS 155
>Z82265-3|CAB05173.1| 471|Caenorhabditis elegans Hypothetical
protein F02H6.5 protein.
Length = 471
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 332 HTLIHFQIFNFNLLTIYKNFFYLIPTLTKKYLKQCTKKAQ 213
H L+ F+ N+L Y NFF+ + + + YLK K A+
Sbjct: 230 HQLVTIDCFDNNILKQYNNFFFHLFGI-ESYLKSLEKVAR 268
>Z81078-5|CAB03078.2| 722|Caenorhabditis elegans Hypothetical
protein F14B4.1 protein.
Length = 722
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = -2
Query: 274 SFILYLH*QKNI*NSVLRRHSNDYTLHFMLSTYIFSIITDDAPPPP 137
SF ++++ + N ++ H N+ + +LS+ ++ T APPPP
Sbjct: 10 SFPVFIYSEVNHATPLILPHRNEDPVFVLLSSTPSTLPTTSAPPPP 55
>Z75535-4|CAA99828.2| 722|Caenorhabditis elegans Hypothetical
protein F14B4.1 protein.
Length = 722
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = -2
Query: 274 SFILYLH*QKNI*NSVLRRHSNDYTLHFMLSTYIFSIITDDAPPPP 137
SF ++++ + N ++ H N+ + +LS+ ++ T APPPP
Sbjct: 10 SFPVFIYSEVNHATPLILPHRNEDPVFVLLSSTPSTLPTTSAPPPP 55
>Z83217-1|CAB05681.1| 376|Caenorhabditis elegans Hypothetical
protein C10C6.2 protein.
Length = 376
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 40 FGSSNWYVLELALLYICAM 96
FG S WY AL ++CAM
Sbjct: 277 FGISKWYSTVFALCHVCAM 295
>Z81484-3|CAB03971.1| 346|Caenorhabditis elegans Hypothetical
protein C47A10.6 protein.
Length = 346
Score = 26.6 bits (56), Expect = 7.2
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 208 HCCAFLVHCFKYFFVNV 258
HC A L+HC FF+++
Sbjct: 66 HCAALLIHCVPRFFLHL 82
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
T01D3.7 protein.
Length = 2882
Score = 26.6 bits (56), Expect = 7.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 235 NSVLRRHSNDYTLHFMLSTYIFSIITDDAPPPPLQIEATPFSP 107
+SVLR +S+ L+F+ S I + P P ++ T FSP
Sbjct: 1124 SSVLRVNSSIPNLNFIASKGIVAWPEPIGSPDPYEVSVTAFSP 1166
>U38377-5|AAP46283.1| 300|Caenorhabditis elegans Map kinase kinase
or erk kinaseprotein 1, isoform b protein.
Length = 300
Score = 26.2 bits (55), Expect = 9.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 214 CAFLVHCFKYFFVNVGIR 267
C ++V CF YF N +R
Sbjct: 126 CPYIVRCFGYFITNFDVR 143
>U38377-4|AAA79746.2| 347|Caenorhabditis elegans Map kinase kinase
or erk kinaseprotein 1, isoform a protein.
Length = 347
Score = 26.2 bits (55), Expect = 9.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 214 CAFLVHCFKYFFVNVGIR 267
C ++V CF YF N +R
Sbjct: 126 CPYIVRCFGYFITNFDVR 143
>AL021386-3|CAA16167.1| 330|Caenorhabditis elegans Hypothetical
protein F57E7.3 protein.
Length = 330
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 19 CTWWSCQFGSSNWYVLELALL 81
CTW F S+ WY+L LL
Sbjct: 2 CTWRGSYFESAEWYLLASHLL 22
>AF125459-7|AAD12836.1| 971|Caenorhabditis elegans Hypothetical
protein Y25C1A.5 protein.
Length = 971
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Frame = -1
Query: 296 LLTIYKNFFYLI---PTLTKKYLKQ 231
+ TIYKNF +LI P L +YL+Q
Sbjct: 160 IFTIYKNFEFLIPDAPELVTEYLEQ 184
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,656,632
Number of Sequences: 27780
Number of extensions: 173152
Number of successful extensions: 543
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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