Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_N18
(793 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC609.05 |pob3||FACT complex component Pob3|Schizosaccharomyce... 31 0.19
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 30 0.33
SPCC417.10 |||membrane transporter|Schizosaccharomyces pombe|chr... 30 0.44
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 29 0.58
SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting pr... 29 1.0
SPAC14C4.11 |||polyphosphate synthetase |Schizosaccharomyces pom... 28 1.3
SPAC1486.06 |||nicotinate phosphoribosyltransferase |Schizosacch... 28 1.3
SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein Ug... 27 2.3
SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9 |Sch... 27 3.1
SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces... 27 3.1
SPBP8B7.31 |||acid phosphatase |Schizosaccharomyces pombe|chr 2|... 27 4.1
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 27 4.1
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 26 5.4
SPAC23C11.09 |||alanine-tRNA ligase |Schizosaccharomyces pombe|c... 26 5.4
SPBC1709.12 |rid1||GTPase binding protein Rid1|Schizosaccharomyc... 25 9.4
SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr 3||... 25 9.4
>SPBC609.05 |pob3||FACT complex component Pob3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 512
Score = 31.1 bits (67), Expect = 0.19
Identities = 21/84 (25%), Positives = 39/84 (46%)
Frame = +1
Query: 382 VLKIHKPIDEVLSRDPALIGYDTSKYLFTDITFGIANEERIIIERDTDGTLRSCDHDIRK 561
V+ + P+ + +R P L+ T D+ + EE ++ E+ D S D +
Sbjct: 271 VIGLEPPLRQGQTRYPFLV---TQFVRDEDMEVDLNIEETVLKEKYADKVKASYDQPAFE 327
Query: 562 KLNQVYFPITGRKIREPHMFSDEE 633
++Q++ +TGRK+ P F E
Sbjct: 328 VVSQIFRGLTGRKVTTPAEFLSHE 351
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 30.3 bits (65), Expect = 0.33
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +1
Query: 496 ERIIIERDTDGTLRSCDHDIRK-KLNQVYF--PITGRKIREPHMFS 624
E +I+ TDGTLR+ +DIRK L+ YF PIT K + FS
Sbjct: 152 EHLIVTGSTDGTLRT--YDIRKGTLSSDYFSHPITSVKTSKSASFS 195
>SPCC417.10 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 508
Score = 29.9 bits (64), Expect = 0.44
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 685 LDPEQTRTLPCPADCEIFPHQKTCVVLLFCVRLLEST 575
+DPE R L DC IFP + L++C++ L+ T
Sbjct: 49 IDPETERRLVRKIDCTIFP----VMCLVYCIQFLDKT 81
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 29.5 bits (63), Expect = 0.58
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 253 RKRNNQGLHALKTPKYKFLTKEELELEIA 339
RK+ N L+ +KTPKY LTK L A
Sbjct: 286 RKKENVNLNLVKTPKYDDLTKMNLSSSTA 314
>SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting
protein homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 455
Score = 28.7 bits (61), Expect = 1.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 250 FRKRNNQGLHALKTPKYKFLTKEELELEIAKANEKADVLLQIPPV-LKIHKPIDEVLSRD 426
F++ N LH++ FL ++LE + +A E+ +VLL + + IDE D
Sbjct: 273 FQRLQNSSLHSI------FLDPKQLEQKAQEAEERKNVLLNFDRTSAQRTRIIDEAADFD 326
Query: 427 PALIGYDT 450
P + DT
Sbjct: 327 PTSLASDT 334
>SPAC14C4.11 |||polyphosphate synthetase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 734
Score = 28.3 bits (60), Expect = 1.3
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +1
Query: 460 LFTDITFGIANEERIIIERDTDGTLRSCDHDIRKKLNQVYFPITGRKIREPHMFSDEEKF 639
++T F I ++ + I D+D + IR+ + P + H D +
Sbjct: 364 VYTRTAFQIPGDDEVRINLDSDWVM------IREDSLDIERPCRDPEDWHRHDIDDADFP 417
Query: 640 HNLLDRGEYE----FVLD-RACIQYEPDEPIF 720
+ L +GEY VL+ R C++Y+ DEP++
Sbjct: 418 YKHLRKGEYSRFPYSVLEIRECVRYDEDEPLW 449
>SPAC1486.06 |||nicotinate phosphoribosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 410
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 643 NLLDRGEYEFVLDRACIQYEPDEPIFQKITSITYQHVDNNKCYNTLR 783
++LD Y+ + +A +++ PD + K T+ + + N + YN LR
Sbjct: 8 SILDTDLYKLTMLQAVLEHYPDAQVSYKYTNRSPKMALNQEAYNWLR 54
>SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein
Ugo1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 627 IRKHVWFSYFASGYWKVHLI*FLSDIMITTAQSSISVSFN 508
I +W A G WK H I FL +++ + QS +S + +
Sbjct: 159 IISELWEKEGARGLWKGHTISFLHNLLYSGLQSWLSATLS 198
>SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 577
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 128 LDITRTHGXYFIINVLTCFVAIFC 57
L ++R H YFI VL CF A FC
Sbjct: 86 LGLSRLHVFYFIRGVLACFSA-FC 108
>SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 995
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +2
Query: 650 WTGESTSLFWIEPAYNMNRTNQYSKRLPVLHTSMWTIINVTT 775
+T T+ +W E N++ Y+ P+ ++ +W +N T
Sbjct: 463 FTNPETTNYWTECLMNLSAAFGYNSSFPLPYSGLWIDMNEPT 504
>SPBP8B7.31 |||acid phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 177
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 52 LLQKIATKHVKTLIIKYXPCVLVISNRKLNIVPSFYDGEQDPAPKFFT 195
+LQ++ + V TL + C + + LN++ DG PA +FFT
Sbjct: 59 ILQELRNQKV-TLCVASRTCAPKYAKQALNLMKVPIDGSLKPAIEFFT 105
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 679 DRACIQYEPDEPIFQKITSITYQHVDNN 762
DR CI P I +TS TY+ +D +
Sbjct: 294 DRECIVVTPSVTIDAPVTSYTYRQIDES 321
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 685 LDPEQTRTLPCPADCEIFPHQKTCVVLL 602
+DP Q +TLP P +I HQ+T LL
Sbjct: 90 VDPVQAQTLPDPLLFDIPDHQETSYSLL 117
>SPAC23C11.09 |||alanine-tRNA ligase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 959
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +1
Query: 577 YFPITGRKIREPHMFSDEEK--FHNLLDRGEYEFVLDRACIQYEPDEPI 717
+FP RK+ + DEE+ F LDRGE F A + P + +
Sbjct: 366 FFPELKRKVDDVRELLDEEEESFSRTLDRGEKMFEQYAAAAKKTPSKTL 414
>SPBC1709.12 |rid1||GTPase binding protein Rid1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 367
Score = 25.4 bits (53), Expect = 9.4
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 37 LKCLYLLQKIATKHVKTLIIKYXPCVLVISNRKLNIVPSFYDGEQD 174
L+CL + + L+ K PC V+ + IV SFY D
Sbjct: 192 LECLSQSTYNVERLISLLLSKKQPCDFVVREVLVQIVHSFYKAHLD 237
>SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 367 LQIPPVLKIHKPIDEVLSRDPALIG 441
LQ+ P L + IDEV DP LIG
Sbjct: 12 LQLLPALGLPSRIDEVDVSDPELIG 36
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,444,990
Number of Sequences: 5004
Number of extensions: 77929
Number of successful extensions: 234
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 234
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 385381248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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