Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_N14
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical pr... 255 2e-68
U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin red... 82 4e-16
AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin r... 82 4e-16
AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin r... 82 4e-16
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 81 7e-16
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 81 7e-16
Z11115-10|CAA77459.1| 503|Caenorhabditis elegans Hypothetical p... 69 3e-12
U00048-15|AAB53835.2| 597|Caenorhabditis elegans Lethal protein... 37 0.016
AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical ... 36 0.021
AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical ... 33 0.26
Z66512-1|CAA91322.1| 638|Caenorhabditis elegans Hypothetical pr... 31 0.60
Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical pr... 31 0.79
AF016446-7|AAC24174.1| 330|Caenorhabditis elegans Serpentine re... 29 2.4
Z19158-1|CAA79574.1| 788|Caenorhabditis elegans Hypothetical pr... 29 4.2
U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical ... 29 4.2
Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z73906-16|CAA98123.1| 722|Caenorhabditis elegans Hypothetical p... 28 5.6
Z72516-4|CAA96690.1| 722|Caenorhabditis elegans Hypothetical pr... 28 5.6
U41555-9|AAB37034.1| 646|Caenorhabditis elegans Hypothetical pr... 28 5.6
U29377-10|AAA68717.1| 140|Caenorhabditis elegans Hypothetical p... 28 5.6
D30651-1|BAA21637.1| 646|Caenorhabditis elegans flavoprotein su... 28 5.6
AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. 28 5.6
AF043693-6|AAB97539.1| 640|Caenorhabditis elegans Hypothetical ... 28 5.6
Z68298-5|CAA92602.1| 290|Caenorhabditis elegans Hypothetical pr... 28 7.4
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 28 7.4
U12965-5|AAA20612.2| 346|Caenorhabditis elegans Serpentine rece... 28 7.4
AC024214-12|AAF36072.2| 370|Caenorhabditis elegans Hypothetical... 28 7.4
Z50756-1|CAA90637.2| 737|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical pr... 27 9.8
AL117200-15|CAB55049.2| 609|Caenorhabditis elegans Hypothetical... 27 9.8
>Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical
protein LLC1.3 protein.
Length = 495
Score = 255 bits (625), Expect = 2e-68
Identities = 126/186 (67%), Positives = 145/186 (77%), Gaps = 1/186 (0%)
Frame = +2
Query: 101 RIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGTCLNVGCIPSK 280
++ R Y+ T DADLVVIG GPGGYVAAIKAAQLGMK V VEK+ TLGGTCLNVGCIPSK
Sbjct: 18 QVLARNYSNTQDADLVVIGGGPGGYVAAIKAAQLGMKTVCVEKNATLGGTCLNVGCIPSK 77
Query: 281 ALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLV 460
ALL+NSH HMA+HDF RGI+ + + KMME K+N+VK LTGGI LF+ NKV V
Sbjct: 78 ALLNNSHYLHMAQHDFAARGIDC-TASLNLPKMMEAKSNSVKQLTGGIKQLFKANKVGHV 136
Query: 461 KGVGTIVAPNKVEVHGEKG-VETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLE 637
+G TIV PN V+ G VET+N +NILIASGSEVTPFPG+T DEKQI++STGALSL
Sbjct: 137 EGFATIVGPNTVQAKKNDGSVETINARNILIASGSEVTPFPGITIDEKQIVSSTGALSLG 196
Query: 638 SVPKKM 655
VPKKM
Sbjct: 197 QVPKKM 202
>U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin
reductase protein 1 protein.
Length = 667
Score = 81.8 bits (193), Expect = 4e-16
Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 11/191 (5%)
Frame = +2
Query: 113 RQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVS---VEKDPT-----LGGTCLNVGC 268
+++ H DL+VIG G GG AA +A++LG KV V+ P LGGTC+NVGC
Sbjct: 165 KEWLRDHTYDLIVIGGGSGGLAAAKEASRLGKKVACLDFVKPSPQGTSWGLGGTCVNVGC 224
Query: 269 IPSKALLHNSHLYHMAKHDFKQRG--IETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQK 442
IP K L+H + L + HD K+ G + G+V + + + + + L G + ++
Sbjct: 225 IPKK-LMHQASLLGHSIHDAKKYGWKLPEGKVEHQWNHLRDSVQDHIASLNWGYRVQLRE 283
Query: 443 NKVNLVKGVGTIVAPNKVE-VHGEKGVETVNTKNILIASGSEVTPFPGVTFDEKQIITST 619
V + G P ++ + +K VE + LI++G +P + ++ ITS
Sbjct: 284 KTVTYINSYGEFTGPFEISATNKKKKVEKLTADRFLISTGLR-PKYPEIPGVKEYTITSD 342
Query: 620 GALSLESVPKK 652
L P K
Sbjct: 343 DLFQLPYSPGK 353
>AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin
reductase homolog protein.
Length = 525
Score = 81.8 bits (193), Expect = 4e-16
Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 11/191 (5%)
Frame = +2
Query: 113 RQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVS---VEKDPT-----LGGTCLNVGC 268
+++ H DL+VIG G GG AA +A++LG KV V+ P LGGTC+NVGC
Sbjct: 23 KEWLRDHTYDLIVIGGGSGGLAAAKEASRLGKKVACLDFVKPSPQGTSWGLGGTCVNVGC 82
Query: 269 IPSKALLHNSHLYHMAKHDFKQRG--IETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQK 442
IP K L+H + L + HD K+ G + G+V + + + + + L G + ++
Sbjct: 83 IPKK-LMHQASLLGHSIHDAKKYGWKLPEGKVEHQWNHLRDSVQDHIASLNWGYRVQLRE 141
Query: 443 NKVNLVKGVGTIVAPNKVE-VHGEKGVETVNTKNILIASGSEVTPFPGVTFDEKQIITST 619
V + G P ++ + +K VE + LI++G +P + ++ ITS
Sbjct: 142 KTVTYINSYGEFTGPFEISATNKKKKVEKLTADRFLISTGLR-PKYPEIPGVKEYTITSD 200
Query: 620 GALSLESVPKK 652
L P K
Sbjct: 201 DLFQLPYSPGK 211
>AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin
reductase protein.
Length = 667
Score = 81.8 bits (193), Expect = 4e-16
Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 11/191 (5%)
Frame = +2
Query: 113 RQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVS---VEKDPT-----LGGTCLNVGC 268
+++ H DL+VIG G GG AA +A++LG KV V+ P LGGTC+NVGC
Sbjct: 165 KEWLRDHTYDLIVIGGGSGGLAAAKEASRLGKKVACLDFVKPSPQGTSWGLGGTCVNVGC 224
Query: 269 IPSKALLHNSHLYHMAKHDFKQRG--IETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQK 442
IP K L+H + L + HD K+ G + G+V + + + + + L G + ++
Sbjct: 225 IPKK-LMHQASLLGHSIHDAKKYGWKLPEGKVEHQWNHLRDSVQDHIASLNWGYRVQLRE 283
Query: 443 NKVNLVKGVGTIVAPNKVE-VHGEKGVETVNTKNILIASGSEVTPFPGVTFDEKQIITST 619
V + G P ++ + +K VE + LI++G +P + ++ ITS
Sbjct: 284 KTVTYINSYGEFTGPFEISATNKKKKVEKLTADRFLISTGLR-PKYPEIPGVKEYTITSD 342
Query: 620 GALSLESVPKK 652
L P K
Sbjct: 343 DLFQLPYSPGK 353
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 81.0 bits (191), Expect = 7e-16
Identities = 56/171 (32%), Positives = 83/171 (48%)
Frame = +2
Query: 140 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGTCLNVGCIPSKALLHNSHLYHMAK 319
D +VIG G GG +A +A + G+ V +E LGGTC+NVGC+P K +++N L+
Sbjct: 8 DYLVIGGGSGGIASARRAREFGVSVGLIESG-RLGGTCVNVGCVPKK-VMYNCSLHAEFI 65
Query: 320 HDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKGVGTIVAPNKVE 499
D G + FD+K + + + +K L G + + V ++G T VE
Sbjct: 66 RDHADYGFDVTLNKFDWKVIKKSRDEYIKRLNGLYESGLKGSSVEYIRGRATFAEDGTVE 125
Query: 500 VHGEKGVETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKK 652
V+G K KN LIA G + T P + E I S G LE +P +
Sbjct: 126 VNGAK----YRGKNTLIAVGGKPT-IPNIKGAEHG-IDSDGFFDLEDLPSR 170
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 81.0 bits (191), Expect = 7e-16
Identities = 56/171 (32%), Positives = 83/171 (48%)
Frame = +2
Query: 140 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGTCLNVGCIPSKALLHNSHLYHMAK 319
D +VIG G GG +A +A + G+ V +E LGGTC+NVGC+P K +++N L+
Sbjct: 22 DYLVIGGGSGGIASARRAREFGVSVGLIESG-RLGGTCVNVGCVPKK-VMYNCSLHAEFI 79
Query: 320 HDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKGVGTIVAPNKVE 499
D G + FD+K + + + +K L G + + V ++G T VE
Sbjct: 80 RDHADYGFDVTLNKFDWKVIKKSRDEYIKRLNGLYESGLKGSSVEYIRGRATFAEDGTVE 139
Query: 500 VHGEKGVETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKK 652
V+G K KN LIA G + T P + E I S G LE +P +
Sbjct: 140 VNGAK----YRGKNTLIAVGGKPT-IPNIKGAEHG-IDSDGFFDLEDLPSR 184
>Z11115-10|CAA77459.1| 503|Caenorhabditis elegans Hypothetical
protein ZK637.10 protein.
Length = 503
Score = 68.9 bits (161), Expect = 3e-12
Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 13/193 (6%)
Frame = +2
Query: 113 RQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK-DPT-------LGGTCLNVGC 268
R+ +++ DL+VIG+G GG + +AA LG V ++ +PT +GGTC NVGC
Sbjct: 13 RRLFSSNKFDLIVIGAGSGGLSCSKRAADLGANVALIDAVEPTPHGHSWGIGGTCANVGC 72
Query: 269 IPSKALLHNSHLYHMAKHDFKQ--RGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQK 442
IP K + + + KH K GI+ ++ D+ + + + VK + +
Sbjct: 73 IPKKLMHQAAIVGKELKHADKYGWNGIDQEKIKHDWNVLSKNVNDRVKANNWIYRVQLNQ 132
Query: 443 NKVNLVKGVGTIVAPNKVEVHGEKGVETVN---TKNILIASGSEVTPFPGVTFDEKQIIT 613
K+N V +K+ + G +T N N++I++G +P + E IT
Sbjct: 133 KKINYFNAYAEFVDKDKIVITGTDKNKTKNFLSAPNVVISTGLR-PKYPNIPGAELG-IT 190
Query: 614 STGALSLESVPKK 652
S +L SVP K
Sbjct: 191 SDDLFTLASVPGK 203
>U00048-15|AAB53835.2| 597|Caenorhabditis elegans Lethal protein
721 protein.
Length = 597
Score = 36.7 bits (81), Expect = 0.016
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Frame = +2
Query: 140 DLVVIGSGPGGYVAAIKAAQLG------MKVVSVEKDPTLGGTCLNVGCIPSKAL 286
D+V++G GP G AAI+ QL ++V VEK +GG L+ I ++AL
Sbjct: 52 DVVIVGGGPSGLSAAIRLRQLAEKAQKELRVCVVEKASVIGGHTLSGAVIETRAL 106
>AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical
protein Y106G6H.5 protein.
Length = 855
Score = 36.3 bits (80), Expect = 0.021
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +2
Query: 113 RQYATT-HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDP--TLGGTCLNVGCIPSKA 283
R Y T +AD+VV G G G A A+ G KV VEKD G T L+ G + S
Sbjct: 13 RSYTTAVANADVVVCGGGISGTSIAYHLAKRGKKVALVEKDSIGCSGATGLSAGLVSSPI 72
Query: 284 LLHNSHLYHMAK 319
++ L +A+
Sbjct: 73 FWQDTSLQAIAQ 84
>AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical
protein F37C4.6 protein.
Length = 544
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +2
Query: 140 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGTCLNVGCIPSKALLHNSHLYHMAK 319
D ++IG G G AA + G KV +E+ +GG + +P S+L + +
Sbjct: 16 DAIIIGGGHNGLTAAAYLTKAGKKVCVLERRHVVGGAAVTEEIVPGFRFSRASYLLSLLR 75
>Z66512-1|CAA91322.1| 638|Caenorhabditis elegans Hypothetical
protein F52H3.2 protein.
Length = 638
Score = 31.5 bits (68), Expect = 0.60
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +2
Query: 101 RIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGTCLNVGCIPSK 280
R+ R + T D D++VIG G G +A AA+ G V V ++ G + C PS
Sbjct: 7 RLLRRCFQT--DVDVIVIGGGHAGCESAAAAARCGSNTVLVTQNKNTIG---EMSCNPSF 61
Query: 281 ALLHNSHL 304
+ HL
Sbjct: 62 GGIGKGHL 69
>Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 31.1 bits (67), Expect = 0.79
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 143 LVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGG 247
+ +IGSGP G AA + ++G VV E+ +GG
Sbjct: 1849 IAIIGSGPSGLGAAAQLVKVGHTVVVYERKNRVGG 1883
>Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 31.1 bits (67), Expect = 0.79
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 143 LVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGG 247
+ +IGSGP G AA + ++G VV E+ +GG
Sbjct: 1849 IAIIGSGPSGLGAAAQLVKVGHTVVVYERKNRVGG 1883
>AF016446-7|AAC24174.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein21 protein.
Length = 330
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 408 PLTALALYSIIFLKSNV 358
P+ LALYS+IF+KSNV
Sbjct: 24 PIYCLALYSLIFIKSNV 40
>Z19158-1|CAA79574.1| 788|Caenorhabditis elegans Hypothetical
protein T23G5.1 protein.
Length = 788
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/63 (25%), Positives = 32/63 (50%)
Frame = +2
Query: 455 LVKGVGTIVAPNKVEVHGEKGVETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSL 634
++ G IV P+ ++ E+G+ T KN LIA+ + G+ D K++ + +S
Sbjct: 635 VLSGDFQIVNPHMLKDLVERGLWTDEMKNRLIANNGSIQNIDGIPSDIKELYRTVWEISQ 694
Query: 635 ESV 643
+ +
Sbjct: 695 KDI 697
>U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical
protein C46H11.2 protein.
Length = 408
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +2
Query: 134 DADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPT 238
D +++VIG+GP G +++ ++ K+ + K T
Sbjct: 170 DKEVIVIGAGPSGIDISLQLSETAKKITLISKKAT 204
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +2
Query: 149 VIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGTCLNVGCIPSKALLHNSHLYHMAKHDF 328
VIG+G G AA + G++V E+ +GGT + S + ++ + ++ K
Sbjct: 7 VIGAGAAGLAAAKHSLAQGLEVEVFEQTGNVGGTWVYSKQTGSHSSMYQNMTTNLPKEVM 66
Query: 329 KQRGI 343
+ RG+
Sbjct: 67 QFRGV 71
>AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical
protein Y48C3A.12 protein.
Length = 675
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 225 STETTFMPSWAALMAATYPPGPEPITTRSA 136
ST T +P+ A+ T PP P P T+ S+
Sbjct: 624 STPTASIPAATAITTTTAPPKPSPTTSESS 653
>Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 443 NKVNLVKGVGTIVAPNKVEVHGEKGVETVNTKNILIASGSEVTPFPG 583
N V LV+ + V + E+HGEKGV + T + L A + P+ G
Sbjct: 372 NSVYLVE-IHASVDSSDGELHGEKGVVFIRTADSLSAVPEDREPYTG 417
>Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 443 NKVNLVKGVGTIVAPNKVEVHGEKGVETVNTKNILIASGSEVTPFPG 583
N V LV+ + V + E+HGEKGV + T + L A + P+ G
Sbjct: 372 NSVYLVE-IHASVDSSDGELHGEKGVVFIRTADSLSAVPEDREPYTG 417
>Z73906-16|CAA98123.1| 722|Caenorhabditis elegans Hypothetical
protein T25G3.4 protein.
Length = 722
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 140 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGT 250
D+++IG G G A+ A G+K VE D GT
Sbjct: 76 DVLIIGGGATGAGVALDAQTRGLKTALVELDDFSSGT 112
>Z72516-4|CAA96690.1| 722|Caenorhabditis elegans Hypothetical
protein T25G3.4 protein.
Length = 722
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 140 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGT 250
D+++IG G G A+ A G+K VE D GT
Sbjct: 76 DVLIIGGGATGAGVALDAQTRGLKTALVELDDFSSGT 112
>U41555-9|AAB37034.1| 646|Caenorhabditis elegans Hypothetical
protein C03G5.1 protein.
Length = 646
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 308 HMAKHDFKQRGIETGEVTFDFKKMME 385
H KH + IETGEV+ D++ +++
Sbjct: 603 HWRKHSIIRSNIETGEVSLDYRPVID 628
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 131 HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 229
H D VV+G+G G AA+ A+ G+K + K
Sbjct: 41 HAYDAVVVGAGGAGLRAAMGLAEGGLKTAVITK 73
>U29377-10|AAA68717.1| 140|Caenorhabditis elegans Hypothetical
protein K05F1.10 protein.
Length = 140
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 436 KEHCDTSCEAFNSISFIFHHLFKVKCNF 353
+ HCD +CE S +HL KC F
Sbjct: 65 ERHCDRTCENLFSPPHCLNHLHHAKCYF 92
>D30651-1|BAA21637.1| 646|Caenorhabditis elegans flavoprotein
subunit of complex II protein.
Length = 646
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 131 HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 229
H D VV+G+G G AA+ A+ G+K + K
Sbjct: 41 HAYDAVVVGAGGAGLRAAMGLAEEGLKTAVITK 73
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 308 HMAKHDFKQRGIETGEVTFDFKKMME 385
H KH + IETGEV+ D++ +++
Sbjct: 603 HWRKHSIIRSNIETGEVSLDYRPVID 628
>AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein.
Length = 700
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 443 NKVNLVKGVGTIVAPNKVEVHGEKGVETVNTKNILIASGSEVTPFPG 583
N V LV+ + V + E+HGEKGV + T + L A + P+ G
Sbjct: 372 NSVYLVE-IHASVDSSDGELHGEKGVVFIRTADSLSAVPEDREPYTG 417
>AF043693-6|AAB97539.1| 640|Caenorhabditis elegans Hypothetical
protein C34B2.7 protein.
Length = 640
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 131 HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 229
H D VV+G+G G AA+ ++ GMK + K
Sbjct: 34 HTFDAVVVGAGGAGLRAAMGLSEGGMKTAVITK 66
>Z68298-5|CAA92602.1| 290|Caenorhabditis elegans Hypothetical
protein F44D12.6 protein.
Length = 290
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 233 PTLGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMM 382
PTL G C + AL H ++ Y K + + R I G + KKM+
Sbjct: 77 PTLPGGCNDENAAKEAALRHKTNQY-FPKWEIQTRRITNGTTKEEMKKMV 125
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = -1
Query: 693 PXSKPITPAPITNIFFGTDSKESAPVDVIICF--SSKVTPGKGVTSDPEAIRIFLVFTVS 520
P S P + AP T FG + +A + +S TP G+ + A +
Sbjct: 284 PTSAP-SSAPATGGLFGASTAPAAATGGLFSIGAASASTPSVGLFGNSSASTTAAAAPAT 342
Query: 519 TPFSPCTSTLFGAT 478
P + T LFGAT
Sbjct: 343 APAAASTGGLFGAT 356
>U12965-5|AAA20612.2| 346|Caenorhabditis elegans Serpentine
receptor, class b (beta)protein 11 protein.
Length = 346
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/33 (33%), Positives = 24/33 (72%)
Frame = -3
Query: 544 NIFGIYSLNTFLSVYFNFIWGNYSSYTFDKINL 446
++FG+ + +T + +NF+ G++SS+ F++I L
Sbjct: 272 SLFGVRTFSTTIVPTYNFVIGSFSSF-FNRIKL 303
>AC024214-12|AAF36072.2| 370|Caenorhabditis elegans Hypothetical
protein Y77E11A.2 protein.
Length = 370
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 101 RIATRQYATTH--DADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDP 235
++ TR+ + +ADLV+ G G ++AA ++ + DP
Sbjct: 100 KVVTREQLAQYLPEADLVISAGGDGTFLAAASVVNDNTPIIGINTDP 146
>Z50756-1|CAA90637.2| 737|Caenorhabditis elegans Hypothetical
protein T08D10.2 protein.
Length = 737
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 143 LVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGG 247
+VVIG+G G AA + G V VE GG
Sbjct: 177 VVVIGAGAAGIAAATQLLTFGFDVAVVEASGLTGG 211
>Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical
protein F36G3.3 protein.
Length = 141
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 342 IPLCLKSCLAIWYRCELCSKAFDGIH 265
+P CL+SC I + C C +A G+H
Sbjct: 114 LPFCLRSCKDIIHTCPNC-RAMIGVH 138
>AL117200-15|CAB55049.2| 609|Caenorhabditis elegans Hypothetical
protein Y50E8A.6 protein.
Length = 609
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 140 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGT 250
D++VIG G G A+ A G+K VE GT
Sbjct: 64 DVLVIGGGSAGAGVALDAQTRGLKTAMVEYGDYCSGT 100
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,505,131
Number of Sequences: 27780
Number of extensions: 333409
Number of successful extensions: 1021
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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