Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_N13
         (351 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   0.82 
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    22   5.8  
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    22   5.8  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 25.0 bits (52), Expect = 0.82
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 116 EIAMTNSYNNILVVHHHDFLPLKLGSKQN*YFLN 217
           EI   NS N + +     +L   +G+K++ YFLN
Sbjct: 79  EIIFDNSDNRVPIDKEEIYLRRVIGAKKDQYFLN 112


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 96  CDXLNYSENFRKVKLSPDLVCSK 28
           CD +N+     K  L+P +V  K
Sbjct: 335 CDTINHPSQLAKTSLAPTIVYLK 357


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -1

Query: 114 STSTSXCDXLNYSENFRKVKLSPDLVCSKSNYLDNI 7
           S +   C+ +      RK+  SPD     + YLD +
Sbjct: 35  SGTAGTCEPVKNCSYVRKILKSPDFSHYDTTYLDTL 70


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,281
Number of Sequences: 2352
Number of extensions: 3259
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25364985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)