Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_N12
         (625 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0619 - 4961588-4962409                                           50   1e-06
09_01_0032 - 541411-541737,542751-543752                               29   3.0  
05_07_0219 - 28474661-28475146,28475979-28476644                       29   3.0  
01_01_0419 - 3146851-3147339,3148428-3148663,3148847-3149793,315...    29   4.0  
06_03_1516 + 30712208-30712780,30712984-30713139,30713819-307139...    28   6.9  
11_08_0028 + 27782072-27782171,27782427-27782620                       27   9.2  
11_08_0013 + 27629086-27629185,27629441-27629634                       27   9.2  
09_06_0188 - 21441377-21442201                                         27   9.2  
06_03_0368 - 19966741-19967204,19967279-19967450                       27   9.2  
04_03_0196 - 12533947-12534470,12536577-12537039,12537673-12537903     27   9.2  
04_03_0114 + 11417041-11417188,11418325-11418399,11421007-114211...    27   9.2  

>11_01_0619 - 4961588-4962409
          Length = 273

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 21/39 (53%), Positives = 29/39 (74%)
 Frame = +1

Query: 121 RCQKCLEFGHWSYECKGKRKILVRPSRTRIMHKNLKAKE 237
           +CQKC + GHW+YECK +R  + RPSRT+ + KN K K+
Sbjct: 95  QCQKCFQPGHWTYECKNERVYISRPSRTQQL-KNPKLKK 132


>09_01_0032 - 541411-541737,542751-543752
          Length = 442

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +1

Query: 121 RCQKCLEFGHWSYECKGKRK 180
           RC+ CL++GH + +CK  ++
Sbjct: 403 RCEDCLQYGHRTRDCKNNKE 422


>05_07_0219 - 28474661-28475146,28475979-28476644
          Length = 383

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 118 IRCQKCLEFGHWSYECKGKRKI 183
           I C++C +FGH++ EC   RK+
Sbjct: 343 IECRRCGKFGHFADECDEPRKM 364


>01_01_0419 -
           3146851-3147339,3148428-3148663,3148847-3149793,
           3150258-3150356,3151128-3151501
          Length = 714

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 118 IRCQKCLEFGHWSYECKGKRKI 183
           I C +C +FGH++ EC   RK+
Sbjct: 674 IECHRCGKFGHFADECDEPRKM 695


>06_03_1516 +
           30712208-30712780,30712984-30713139,30713819-30713985,
           30714108-30714357,30714400-30715182,30715437-30715753,
           30715775-30716036
          Length = 835

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +1

Query: 112 QGIRCQKCLEFGHWSYECKGKRKILV-RPSR 201
           QG+RC  C +  H +  C  K+K  V RP +
Sbjct: 298 QGVRCASCHKLDHRALACWNKKKAQVWRPKK 328


>11_08_0028 + 27782072-27782171,27782427-27782620
          Length = 97

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1

Query: 451 CLNRCQIQNHCCSLNQTRSPIHCCCHYQTSSN 356
           C++ CQI+     L    S  HCCC  +  +N
Sbjct: 53  CMSDCQIKGFNGGLCDGESNDHCCCTDEARTN 84


>11_08_0013 + 27629086-27629185,27629441-27629634
          Length = 97

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1

Query: 451 CLNRCQIQNHCCSLNQTRSPIHCCCHYQTSSN 356
           C++ CQI+     L    S  HCCC  +  +N
Sbjct: 53  CMSDCQIKGFNGGLCDGESNDHCCCTDEARTN 84


>09_06_0188 - 21441377-21442201
          Length = 274

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +1

Query: 121 RCQKCLEFGHWSYEC 165
           RC +C E GH SYEC
Sbjct: 166 RCYECGEEGHLSYEC 180


>06_03_0368 - 19966741-19967204,19967279-19967450
          Length = 211

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 118 IRCQKCLEFGHWSYECKGKRKI 183
           I C +C +FGH++ EC   RK+
Sbjct: 171 IECCRCGKFGHFADECDEPRKM 192


>04_03_0196 - 12533947-12534470,12536577-12537039,12537673-12537903
          Length = 405

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 121 RCQKCLEFGHWSYE-CKGKRKILVRPSRTRIMHKNLKAKEEGQ 246
           +C+ C + GHW+ + CK KR          ++ +  +A +EG+
Sbjct: 160 KCRYCGKLGHWAKDCCKAKRDREKLAQANLLITEPAQAADEGE 202


>04_03_0114 +
           11417041-11417188,11418325-11418399,11421007-11421107,
           11422049-11422120,11422239-11422757,11422949-11423149
          Length = 371

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 112 QGIRCQKCLEFGHWSYEC 165
           +G RC KC EFGH    C
Sbjct: 240 KGARCYKCHEFGHIRRNC 257


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,944,914
Number of Sequences: 37544
Number of extensions: 206268
Number of successful extensions: 667
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)