Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_N11
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 312 1e-85
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 312 1e-85
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 312 1e-85
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 312 1e-85
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 287 5e-78
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 287 5e-78
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 286 1e-77
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 286 1e-77
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 285 3e-77
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 281 3e-76
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 281 3e-76
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 279 1e-75
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 262 1e-70
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 262 2e-70
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 243 1e-64
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 231 5e-61
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 140 1e-33
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 137 6e-33
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 137 6e-33
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 137 6e-33
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 136 1e-32
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 135 2e-32
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 118 5e-27
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 118 5e-27
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 74 8e-14
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 74 8e-14
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.44
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 3.1
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 3.1
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 3.1
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 312 bits (767), Expect = 1e-85
Identities = 143/199 (71%), Positives = 158/199 (79%)
Frame = +1
Query: 88 LGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 267
+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV V
Sbjct: 9 IGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMV 68
Query: 268 DLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQ 447
DLEPTV+DE+RTGTYR LFHP QLITGKEDAANNYARGHYTIGKEI+ L LDRIR+LAD
Sbjct: 69 DLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADN 128
Query: 448 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXXXXXXXYNSI 627
CTGLQGFL+FH LLMERLSVDYGKK+ LEF+IY YNSI
Sbjct: 129 CTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSI 188
Query: 628 XXXXXXXXXSDCAFMVDNE 684
SDC+FMVDNE
Sbjct: 189 LTTHTTLEHSDCSFMVDNE 207
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 312 bits (767), Expect = 1e-85
Identities = 143/199 (71%), Positives = 158/199 (79%)
Frame = +1
Query: 88 LGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 267
+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV V
Sbjct: 8 IGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMV 67
Query: 268 DLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQ 447
DLEPTV+DE+RTGTYR LFHP QLITGKEDAANNYARGHYTIGKEI+ L LDRIR+LAD
Sbjct: 68 DLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADN 127
Query: 448 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXXXXXXXYNSI 627
CTGLQGFL+FH LLMERLSVDYGKK+ LEF+IY YNSI
Sbjct: 128 CTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSI 187
Query: 628 XXXXXXXXXSDCAFMVDNE 684
SDC+FMVDNE
Sbjct: 188 LTTHTTLEHSDCSFMVDNE 206
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 312 bits (767), Expect = 1e-85
Identities = 143/199 (71%), Positives = 158/199 (79%)
Frame = +1
Query: 88 LGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 267
+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV V
Sbjct: 9 IGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMV 68
Query: 268 DLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQ 447
DLEPTV+DE+RTGTYR LFHP QLITGKEDAANNYARGHYTIGKEI+ L LDRIR+LAD
Sbjct: 69 DLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADN 128
Query: 448 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXXXXXXXYNSI 627
CTGLQGFL+FH LLMERLSVDYGKK+ LEF+IY YNSI
Sbjct: 129 CTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSI 188
Query: 628 XXXXXXXXXSDCAFMVDNE 684
SDC+FMVDNE
Sbjct: 189 LTTHTTLEHSDCSFMVDNE 207
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 312 bits (767), Expect = 1e-85
Identities = 143/199 (71%), Positives = 158/199 (79%)
Frame = +1
Query: 88 LGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 267
+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+HVPRAV V
Sbjct: 9 IGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMV 68
Query: 268 DLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQ 447
DLEPTV+DE+RTGTYR LFHP QLITGKEDAANNYARGHYTIGKEI+ L LDRIR+LAD
Sbjct: 69 DLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADN 128
Query: 448 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXXXXXXXYNSI 627
CTGLQGFL+FH LLMERLSVDYGKK+ LEF+IY YNSI
Sbjct: 129 CTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSI 188
Query: 628 XXXXXXXXXSDCAFMVDNE 684
SDC+FMVDNE
Sbjct: 189 LTTHTTLEHSDCSFMVDNE 207
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 287 bits (704), Expect = 5e-78
Identities = 133/199 (66%), Positives = 152/199 (76%)
Frame = +1
Query: 88 LGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 267
+GQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G++VPR++FV
Sbjct: 9 VGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRYVPRSIFV 66
Query: 268 DLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQ 447
DLEPTVVDE+RTGTY++LFHP Q+ITGKEDAANNYARGHYT+GKE++ VLDRIR+LAD
Sbjct: 67 DLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADN 126
Query: 448 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXXXXXXXYNSI 627
C+GLQGF +FH LLMERLSVDYGKKS LEF+IY YNSI
Sbjct: 127 CSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
Query: 628 XXXXXXXXXSDCAFMVDNE 684
SDCAFMVDNE
Sbjct: 187 LTTHTTLEHSDCAFMVDNE 205
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 287 bits (704), Expect = 5e-78
Identities = 133/199 (66%), Positives = 152/199 (76%)
Frame = +1
Query: 88 LGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 267
+GQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G++VPR++FV
Sbjct: 9 VGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRYVPRSIFV 66
Query: 268 DLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQ 447
DLEPTVVDE+RTGTY++LFHP Q+ITGKEDAANNYARGHYT+GKE++ VLDRIR+LAD
Sbjct: 67 DLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADN 126
Query: 448 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXXXXXXXYNSI 627
C+GLQGF +FH LLMERLSVDYGKKS LEF+IY YNSI
Sbjct: 127 CSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
Query: 628 XXXXXXXXXSDCAFMVDNE 684
SDCAFMVDNE
Sbjct: 187 LTTHTTLEHSDCAFMVDNE 205
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 286 bits (701), Expect = 1e-77
Identities = 132/199 (66%), Positives = 152/199 (76%)
Frame = +1
Query: 88 LGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 267
+GQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G++VPR++FV
Sbjct: 9 VGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGRYVPRSIFV 66
Query: 268 DLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQ 447
DLEPTVVDE+RTGTY++LFHP Q+ITGKEDAANNYARGHYT+GKE++ VLDRIR+LAD
Sbjct: 67 DLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADN 126
Query: 448 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXXXXXXXYNSI 627
C+GLQGF +FH LLMERLSVDYGKKS LEF+IY YNSI
Sbjct: 127 CSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
Query: 628 XXXXXXXXXSDCAFMVDNE 684
SDCAFMVDNE
Sbjct: 187 LTTHTTLEHSDCAFMVDNE 205
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 286 bits (701), Expect = 1e-77
Identities = 132/199 (66%), Positives = 152/199 (76%)
Frame = +1
Query: 88 LGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 267
+GQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G++VPR++FV
Sbjct: 9 VGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGRYVPRSIFV 66
Query: 268 DLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQ 447
DLEPTVVDE+RTGTY++LFHP Q+ITGKEDAANNYARGHYT+GKE++ VLDRIR+LAD
Sbjct: 67 DLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADN 126
Query: 448 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXXXXXXXYNSI 627
C+GLQGF +FH LLMERLSVDYGKKS LEF+IY YNSI
Sbjct: 127 CSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTAVVEPYNSI 186
Query: 628 XXXXXXXXXSDCAFMVDNE 684
SDCAFMVDNE
Sbjct: 187 LTTHTTLEHSDCAFMVDNE 205
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 285 bits (698), Expect = 3e-77
Identities = 130/199 (65%), Positives = 149/199 (74%)
Frame = +1
Query: 88 LGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 267
+GQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AGKHVPRA+ V
Sbjct: 14 VGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKHVPRAIMV 73
Query: 268 DLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQ 447
DLEPT +DE+RTGTY+ LFHP QL+TGKEDAANNYARGHYTIGKEI+ +V+DR+R+L +
Sbjct: 74 DLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRLVEN 133
Query: 448 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXXXXXXXYNSI 627
C GLQGFL+FH LLMERLSVDYGKKS LEF IY YNSI
Sbjct: 134 CRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVSTSMVEPYNSI 193
Query: 628 XXXXXXXXXSDCAFMVDNE 684
SDC+FMVDNE
Sbjct: 194 LTTHTTLEHSDCSFMVDNE 212
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 281 bits (689), Expect = 3e-76
Identities = 130/199 (65%), Positives = 150/199 (75%)
Frame = +1
Query: 88 LGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 267
+GQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G++VPR++FV
Sbjct: 9 VGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGRYVPRSIFV 66
Query: 268 DLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQ 447
DLEPTVVDE+RTG Y++LFHP Q+ITGKEDAANNYARGHYT+GKE++ LDRIR+LAD
Sbjct: 67 DLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADN 126
Query: 448 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXXXXXXXYNSI 627
C+GLQGF +FH LLMERLSVDYGKKS LEF+IY YNSI
Sbjct: 127 CSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
Query: 628 XXXXXXXXXSDCAFMVDNE 684
SDCAFMVDNE
Sbjct: 187 LTTHTTLEHSDCAFMVDNE 205
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 281 bits (689), Expect = 3e-76
Identities = 130/199 (65%), Positives = 150/199 (75%)
Frame = +1
Query: 88 LGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 267
+GQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G++VPR++FV
Sbjct: 9 VGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGRYVPRSIFV 66
Query: 268 DLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQ 447
DLEPTVVDE+RTG Y++LFHP Q+ITGKEDAANNYARGHYT+GKE++ LDRIR+LAD
Sbjct: 67 DLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADN 126
Query: 448 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXXXXXXXYNSI 627
C+GLQGF +FH LLMERLSVDYGKKS LEF+IY YNSI
Sbjct: 127 CSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
Query: 628 XXXXXXXXXSDCAFMVDNE 684
SDCAFMVDNE
Sbjct: 187 LTTHTTLEHSDCAFMVDNE 205
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 279 bits (685), Expect = 1e-75
Identities = 126/199 (63%), Positives = 150/199 (75%)
Frame = +1
Query: 88 LGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 267
+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GKHVPRA+FV
Sbjct: 9 IGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGKHVPRAIFV 68
Query: 268 DLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQ 447
DLEPTV+DEVRTGTY +LFHP QLI+GKEDAANNYARGHYTIGKE++ +V+DR+R+L ++
Sbjct: 69 DLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRRLTER 128
Query: 448 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXXXXXXXYNSI 627
C LQGFLIFH L+MERLS+DYGKK+ LEF+IY YNS+
Sbjct: 129 CQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTSMVEPYNSL 188
Query: 628 XXXXXXXXXSDCAFMVDNE 684
SDC+F++DNE
Sbjct: 189 LTTHTTLEHSDCSFIMDNE 207
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 262 bits (643), Expect = 1e-70
Identities = 122/199 (61%), Positives = 141/199 (70%)
Frame = +1
Query: 88 LGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 267
+GQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+HVPR++FV
Sbjct: 9 VGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGRHVPRSIFV 65
Query: 268 DLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQ 447
DLEPTVVDE+RTG Y++LFHP Q++TGKEDAANNYARGHYT+GKEI+ LDRIR+LA+
Sbjct: 66 DLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRRLANN 125
Query: 448 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXXXXXXXYNSI 627
C GLQGF +FH +LMERLS +YGKKS LEF+IY YNSI
Sbjct: 126 CEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSVVEPYNSI 185
Query: 628 XXXXXXXXXSDCAFMVDNE 684
SDC+FMVDNE
Sbjct: 186 LTTHTTLEHSDCSFMVDNE 204
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 262 bits (642), Expect = 2e-70
Identities = 122/199 (61%), Positives = 141/199 (70%)
Frame = +1
Query: 88 LGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 267
+GQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FV
Sbjct: 15 VGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFV 74
Query: 268 DLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQ 447
DLEPTVVDEVRTGTYR LFHP QL++GKEDAAN YARG YTIG+E++ +V+DR+++LA+
Sbjct: 75 DLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAEN 134
Query: 448 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXXXXXXXYNSI 627
C GLQGF+IFH LLMERLS +YGKK LEFAIY YNSI
Sbjct: 135 CNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSI 194
Query: 628 XXXXXXXXXSDCAFMVDNE 684
SDC FMVDNE
Sbjct: 195 LMTHTTLEHSDCTFMVDNE 213
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 243 bits (594), Expect = 1e-64
Identities = 116/208 (55%), Positives = 139/208 (66%)
Frame = +1
Query: 61 KCVSASLYTLGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 240
+CVS + GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ G
Sbjct: 7 ECVSIHI---GQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNG 62
Query: 241 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVL 420
KHVPRA++VDLEPTV+DE+R G Y LFHP Q+I GKEDAANNYARGHYTIGKE++ +VL
Sbjct: 63 KHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVL 122
Query: 421 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXX 600
DRIRK + C GLQGFL+FH LLMERLSV++GKKS LEF++Y
Sbjct: 123 DRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVST 182
Query: 601 XXXXXYNSIXXXXXXXXXSDCAFMVDNE 684
YNSI SDC+FMVDNE
Sbjct: 183 SVVEPYNSILTTHTTLELSDCSFMVDNE 210
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 231 bits (564), Expect = 5e-61
Identities = 108/185 (58%), Positives = 127/185 (68%)
Frame = +1
Query: 130 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 309
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 310 YRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQCTGLQGFLIFHXXX 489
YR LFHP QL++GKEDAAN YARG YTIG+E++ +V+DR+++LA+ C GLQGF+IFH
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 490 XXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXXXXXXXYNSIXXXXXXXXXSDCAF 669
LLMERLS +YGKK LEFAIY YNSI SDC F
Sbjct: 121 GGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTF 180
Query: 670 MVDNE 684
MVDNE
Sbjct: 181 MVDNE 185
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 140 bits (338), Expect = 1e-33
Identities = 73/198 (36%), Positives = 102/198 (51%)
Frame = +1
Query: 91 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 270
GQ G QIG WE+ EHGIQPDG + + + N +++E GK+VPRAV VD
Sbjct: 10 GQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGKYVPRAVLVD 67
Query: 271 LEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQC 450
LEP +D VR+G + QLF P + G+ A NN+A+GHYT G E+V VLD +RK A+ C
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEGC 127
Query: 451 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXXXXXXXYNSIX 630
LQGF + H LL+ ++ +Y + F++ YN+
Sbjct: 128 DCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATL 187
Query: 631 XXXXXXXXSDCAFMVDNE 684
+D F +DNE
Sbjct: 188 SVHQLVENTDETFCIDNE 205
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 137 bits (332), Expect = 6e-33
Identities = 72/198 (36%), Positives = 103/198 (52%)
Frame = +1
Query: 91 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 270
GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK+VPRAV VD
Sbjct: 10 GQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGKYVPRAVLVD 67
Query: 271 LEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQC 450
LEP +D VR+G + QLF P + G+ A NN+A+GHYT G E+V VLD IRK A+ C
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGC 127
Query: 451 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXXXXXXXYNSIX 630
LQGF + H LL+ ++ +Y + F++ YN+
Sbjct: 128 DCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATL 187
Query: 631 XXXXXXXXSDCAFMVDNE 684
+D + +DNE
Sbjct: 188 SVHQLVENTDETYCIDNE 205
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 137 bits (332), Expect = 6e-33
Identities = 72/198 (36%), Positives = 102/198 (51%)
Frame = +1
Query: 91 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 270
GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K+VPRAV VD
Sbjct: 10 GQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNKYVPRAVLVD 67
Query: 271 LEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQC 450
LEP +D VR+G + QLF P + G+ A NN+A+GHYT G E+V VLD +RK A+
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEST 127
Query: 451 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXXXXXXXYNSIX 630
LQGF + H LL+ ++ +Y + F++ YN+
Sbjct: 128 DCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATL 187
Query: 631 XXXXXXXXSDCAFMVDNE 684
+D F +DNE
Sbjct: 188 SVHQLVENTDSTFCIDNE 205
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 137 bits (332), Expect = 6e-33
Identities = 72/198 (36%), Positives = 102/198 (51%)
Frame = +1
Query: 91 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 270
GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K+VPRAV VD
Sbjct: 10 GQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNKYVPRAVLVD 67
Query: 271 LEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQC 450
LEP +D VR+G + QLF P + G+ A NN+A+GHYT G E+V VLD +RK A+
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEST 127
Query: 451 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXXXXXXXYNSIX 630
LQGF + H LL+ ++ +Y + F++ YN+
Sbjct: 128 DCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATL 187
Query: 631 XXXXXXXXSDCAFMVDNE 684
+D F +DNE
Sbjct: 188 SVHQLVENTDSTFCIDNE 205
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 136 bits (329), Expect = 1e-32
Identities = 71/198 (35%), Positives = 103/198 (52%)
Frame = +1
Query: 91 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 270
GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK+VPRAV VD
Sbjct: 10 GQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGKYVPRAVLVD 67
Query: 271 LEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQC 450
LEP +D VR+G + QLF P + G+ A NN+A+GHYT G E+V VLD IRK A+ C
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGC 127
Query: 451 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXXXXXXXYNSIX 630
LQGF + H LL+ ++ ++ + F++ YN+
Sbjct: 128 DCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDTVVEPYNATL 187
Query: 631 XXXXXXXXSDCAFMVDNE 684
+D + +DNE
Sbjct: 188 SVHQLVENTDETYCIDNE 205
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 135 bits (327), Expect = 2e-32
Identities = 71/198 (35%), Positives = 99/198 (50%)
Frame = +1
Query: 91 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 270
GQ G QIG WE+ EHGI P G D + + N +++E GK+VPRA VD
Sbjct: 10 GQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGKYVPRACLVD 67
Query: 271 LEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQC 450
LEP +D VR G + QLF P + G+ A NN+A+GHYT G E+V VLD +RK A+ C
Sbjct: 68 LEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESC 127
Query: 451 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXXXXXXXYNSIX 630
LQGF + H LL+ ++ +Y + + F++ YN+
Sbjct: 128 DCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTVVEPYNATL 187
Query: 631 XXXXXXXXSDCAFMVDNE 684
+D F +DNE
Sbjct: 188 SVHQLVENTDETFCIDNE 205
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 118 bits (283), Expect = 5e-27
Identities = 66/199 (33%), Positives = 96/199 (48%)
Frame = +1
Query: 88 LGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 267
+GQ G QIG WE EHG+Q DG D G + +++ E K+VPRA+ V
Sbjct: 9 VGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRKYVPRAILV 66
Query: 268 DLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQ 447
DL+P ++ VR+ Y +LF P ++G+ A NN++RG+Y G EIV VL IR+ A+
Sbjct: 67 DLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEA 126
Query: 448 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXXXXXXXYNSI 627
L+GF + H LL+ +L +Y K+ +I YN+I
Sbjct: 127 ADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAI 186
Query: 628 XXXXXXXXXSDCAFMVDNE 684
D F +DNE
Sbjct: 187 LSMPHLMDNCDENFCIDNE 205
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 118 bits (283), Expect = 5e-27
Identities = 66/199 (33%), Positives = 96/199 (48%)
Frame = +1
Query: 88 LGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 267
+GQ G QIG WE EHG+Q DG D G + +++ E K+VPRA+ V
Sbjct: 9 VGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRKYVPRAILV 66
Query: 268 DLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQ 447
DL+P ++ VR+ Y +LF P ++G+ A NN++RG+Y G EIV VL IR+ A+
Sbjct: 67 DLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEA 126
Query: 448 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIYXXXXXXXXXXXXYNSI 627
L+GF + H LL+ +L +Y K+ +I YN+I
Sbjct: 127 ADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAI 186
Query: 628 XXXXXXXXXSDCAFMVDNE 684
D F +DNE
Sbjct: 187 LSMPHLMDNCDENFCIDNE 205
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 74.1 bits (174), Expect = 8e-14
Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
Frame = +1
Query: 88 LGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 267
+GQ G Q+ A W+ EHGI GQ + + +D + F + +VPRAV V
Sbjct: 12 VGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPRAVLV 68
Query: 268 DLEPTVVD-EVRTGTYRQLFHPXQLITGKE--DAANNYARGHYTIGKEIVXLVLDRIRKL 438
DLEP V++ +++ + LF+ + A NN+A G Y G+E+ ++D I +
Sbjct: 69 DLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIRE 127
Query: 439 ADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIY 579
A+ L G L H LL+ERL + KK ++++
Sbjct: 128 AENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVF 174
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 74.1 bits (174), Expect = 8e-14
Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
Frame = +1
Query: 88 LGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 267
+GQ G Q+ A W+ EHGI GQ + + +D + F + +VPRAV V
Sbjct: 12 VGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPRAVLV 68
Query: 268 DLEPTVVD-EVRTGTYRQLFHPXQLITGKE--DAANNYARGHYTIGKEIVXLVLDRIRKL 438
DLEP V++ +++ + LF+ + A NN+A G Y G+E+ ++D I +
Sbjct: 69 DLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIRE 127
Query: 439 ADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSXLEFAIY 579
A+ L G L H LL+ERL + KK ++++
Sbjct: 128 AENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVF 174
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.44
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 92 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 247
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 106 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 285
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 286 VDE 294
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 106 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 285
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 286 VDE 294
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 106 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 285
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 286 VDE 294
DE
Sbjct: 116 ADE 118
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,422,448
Number of Sequences: 27780
Number of extensions: 296964
Number of successful extensions: 738
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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