Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_N08
(795 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 208 3e-54
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 208 3e-54
U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protei... 131 5e-31
AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin prot... 111 7e-25
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 110 1e-24
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 46 2e-05
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 46 2e-05
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 46 2e-05
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical pr... 37 0.019
U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.72
U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein. 31 0.95
U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein. 31 0.95
U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein. 31 0.95
U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein. 31 0.95
U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein. 31 0.95
AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated... 31 0.95
AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated... 31 0.95
AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated... 31 0.95
U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical pr... 30 1.7
U42844-6|AAB53814.1| 344|Caenorhabditis elegans Hypothetical pr... 29 5.1
AC084153-10|AAK84591.1| 184|Caenorhabditis elegans Hypothetical... 28 6.7
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 28 8.9
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 28 8.9
>Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 208 bits (509), Expect = 3e-54
Identities = 101/188 (53%), Positives = 138/188 (73%), Gaps = 1/188 (0%)
Frame = +3
Query: 90 ANNRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPENTSGDMDNFYEVLKDGTL 269
+++RA KSG A EAQ+KI KY + LA E L+W++ +TG+ +T GD DN +V +DG+L
Sbjct: 6 SSDRAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSL 65
Query: 270 LCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNS 449
LC LAN++ P +KK+NTS+MAFK MENI+ FL+ A + V E FQTVDL+E Q+ N+
Sbjct: 66 LCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNA 124
Query: 450 VVICLQSLGRKA-GTYGKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI 626
V+ICL SL RK+ +G+ +GPKEA+ + R +++EQL+AG VI LQ GSNKGA SG+
Sbjct: 125 VLICLASLARKSEKNFGRSGLGPKEAQGDRREWTDEQLKAGHNVIGLQMGSNKGATASGL 184
Query: 627 NFGNTRHM 650
N GNTRHM
Sbjct: 185 NMGNTRHM 192
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 208 bits (509), Expect = 3e-54
Identities = 101/188 (53%), Positives = 138/188 (73%), Gaps = 1/188 (0%)
Frame = +3
Query: 90 ANNRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPENTSGDMDNFYEVLKDGTL 269
+++RA KSG A EAQ+KI KY + LA E L+W++ +TG+ +T GD DN +V +DG+L
Sbjct: 6 SSDRAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSL 65
Query: 270 LCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNS 449
LC LAN++ P +KK+NTS+MAFK MENI+ FL+ A + V E FQTVDL+E Q+ N+
Sbjct: 66 LCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNA 124
Query: 450 VVICLQSLGRKA-GTYGKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI 626
V+ICL SL RK+ +G+ +GPKEA+ + R +++EQL+AG VI LQ GSNKGA SG+
Sbjct: 125 VLICLASLARKSEKNFGRSGLGPKEAQGDRREWTDEQLKAGHNVIGLQMGSNKGATASGL 184
Query: 627 NFGNTRHM 650
N GNTRHM
Sbjct: 185 NMGNTRHM 192
>U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protein 3
protein.
Length = 142
Score = 131 bits (317), Expect = 5e-31
Identities = 66/135 (48%), Positives = 89/135 (65%)
Frame = +3
Query: 96 NRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPENTSGDMDNFYEVLKDGTLLC 275
NR T G ++K +SK+ ++ A LEWI+ ++GE +TSG+ DNF+ +LKDGTLLC
Sbjct: 3 NRTTAGGIGFAVRQKQDSKFIDKEATLLLEWIKKLSGENISTSGERDNFHNLLKDGTLLC 62
Query: 276 KLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVV 455
K AN I IKK+ F CMENINAF+E A++ GVP +ETFQ+V+L E ++L SV
Sbjct: 63 KAANGIEAGSIKKVQKPISTFACMENINAFVEFAKKQGVPNEETFQSVELVEGRDLFSVC 122
Query: 456 ICLQSLGRKAGTYGK 500
+ L SLGR GK
Sbjct: 123 VTLLSLGRVLQKAGK 137
>AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin protein
4 protein.
Length = 154
Score = 111 bits (266), Expect = 7e-25
Identities = 64/146 (43%), Positives = 82/146 (56%)
Frame = +3
Query: 96 NRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPENTSGDMDNFYEVLKDGTLLC 275
+R +G A K SK+++ A LEWIR +T E + DNF E LKDG LC
Sbjct: 6 HRPRPAGMAGAILDKQASKFNDVEAGYLLEWIRDLTKEDFDCEASRDNFREQLKDGQRLC 65
Query: 276 KLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVV 455
KL N I +KKI F C+ENIN F AAR LGV +ETFQ+VDL++ ++L SV
Sbjct: 66 KLVNAIKAGSVKKIMKPISNFNCLENINQFSTAARSLGVKDEETFQSVDLFDGRDLFSVT 125
Query: 456 ICLQSLGRKAGTYGKPSIGPKEAEKN 533
+ LQSL RK G PK+ K+
Sbjct: 126 VTLQSLARKVEKLG--ITPPKQVSKD 149
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 110 bits (265), Expect = 1e-24
Identities = 70/187 (37%), Positives = 99/187 (52%), Gaps = 9/187 (4%)
Frame = +3
Query: 96 NRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGE----PENTSGDMDNFYEVLKDG 263
N G + E Q+K ++++ E A E L+WI +TGE T + +LKDG
Sbjct: 3 NHGPSYGLSRELQKKNDARFVLEEAIEVLKWIENVTGERFSFDVTTCESSTDVSNLLKDG 62
Query: 264 TLLCKLANNIHPNMIKKINTS-SMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQN 440
+LCKL + P+ N MAF MENI+ FL AA+Q GV FQTVDL+E +
Sbjct: 63 VMLCKLIEKLDPSCRVVYNKKPKMAFPMMENISNFLAAAKQFGVMEISCFQTVDLYENKQ 122
Query: 441 LNSVVICLQSLGRKAGTYGK----PSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNKG 608
V+ CL+ L A + P+ K A+ + R F E +R G+ VI LQYG+NK
Sbjct: 123 CYKVIECLRLLAAVAQSRSSHLEHPAWVVKLAQSSPRQFPEAVMRRGEMVIPLQYGTNKC 182
Query: 609 ANQSGIN 629
A+Q G++
Sbjct: 183 ASQKGMS 189
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Frame = +3
Query: 186 WIRMITGEPENTSGDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMEN 353
W+R + + +G M F VL+DG LLC+LAN + PN I KKI ++ F C N
Sbjct: 14 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 73
Query: 354 INAF-LEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSL 473
IN F + + + F DL+ V+ L L
Sbjct: 74 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 114
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Frame = +3
Query: 186 WIRMITGEPENTSGDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMEN 353
W+R + + +G M F VL+DG LLC+LAN + PN I KKI ++ F C N
Sbjct: 46 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 105
Query: 354 INAF-LEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSL 473
IN F + + + F DL+ V+ L L
Sbjct: 106 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 146
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Frame = +3
Query: 186 WIRMITGEPENTSGDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMEN 353
W+R + + +G M F VL+DG LLC+LAN + PN I KKI ++ F C N
Sbjct: 46 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 105
Query: 354 INAF-LEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSL 473
IN F + + + F DL+ V+ L L
Sbjct: 106 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 146
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +3
Query: 225 GDMDNFYEVLKDGTLLCKLANNIHPNMIKKINT--SSMA-FKCMENINAFLEAARQLGVP 395
GD+ +F L DG LCK N +HP I ++ SS+A + N++ FL+ R++GVP
Sbjct: 540 GDI-SFSLQLSDGQELCKFINKLHPESISLASSTDSSIATTRSKMNVDRFLQYCRKIGVP 598
Query: 396 AQETFQTVDLWERQNLNSV 452
+D+ ++N V
Sbjct: 599 ETTLCSQMDIISKRNPQKV 617
>U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical
protein T25F10.6a protein.
Length = 406
Score = 36.7 bits (81), Expect = 0.019
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +3
Query: 429 ERQNLNSVVICLQSLGRK-AGTYGKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNK 605
E+ + ++ LQS K A G IG +VR + +Q R QG I LQ G+NK
Sbjct: 192 EKARASDGIVPLQSGTNKLASQAGMTGIGMPRIV-DVRR-TNDQDRDSQGFIHLQMGTNK 249
Query: 606 GANQSGI-NFGNTRH 647
ANQ+G+ FG RH
Sbjct: 250 FANQAGMTGFGMPRH 264
Score = 31.9 bits (69), Expect = 0.54
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3
Query: 549 EEQLRAGQGVISLQYGSNKGANQSGI 626
EE+ RA G++ LQ G+NK A+Q+G+
Sbjct: 191 EEKARASDGIVPLQSGTNKLASQAGM 216
Score = 31.5 bits (68), Expect = 0.72
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +3
Query: 432 RQNLNSVVICLQSLGRKAGTY--GKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNK 605
RQ +N QS+ RK Y GKPS ++E+L +G+I +Q GSNK
Sbjct: 62 RQQVNFTPSIPQSVLRKQQNYSSGKPST----------IHTKEKLMRSEGIIPIQAGSNK 111
Query: 606 GANQSGI-NFGNTR 644
A+Q G+ FG R
Sbjct: 112 YASQKGMTGFGVPR 125
>U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical
protein T25F10.6b protein.
Length = 301
Score = 31.5 bits (68), Expect = 0.72
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +3
Query: 432 RQNLNSVVICLQSLGRKAGTY--GKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNK 605
RQ +N QS+ RK Y GKPS ++E+L +G+I +Q GSNK
Sbjct: 62 RQQVNFTPSIPQSVLRKQQNYSSGKPST----------IHTKEKLMRSEGIIPIQAGSNK 111
Query: 606 GANQSGI-NFGNTR 644
A+Q G+ FG R
Sbjct: 112 YASQKGMTGFGVPR 125
>U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 31.1 bits (67), Expect = 0.95
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 549 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 644
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 120 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 152
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 555 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 647
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 256 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 287
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 528 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 647
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 12 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 52
>U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein.
Length = 565
Score = 31.1 bits (67), Expect = 0.95
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 549 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 644
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 328 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 360
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 555 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 647
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 464 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 495
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 528 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 647
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 220 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 260
>U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 31.1 bits (67), Expect = 0.95
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 549 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 644
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 137 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 169
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 555 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 647
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 273 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 304
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 528 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 647
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 29 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 69
>U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 31.1 bits (67), Expect = 0.95
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 549 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 644
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 120 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 152
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 555 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 647
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 256 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 287
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 528 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 647
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 12 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 52
>U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 31.1 bits (67), Expect = 0.95
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 549 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 644
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 137 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 169
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 555 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 647
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 273 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 304
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 528 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 647
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 29 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 69
>AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated
protein 87, isoform c protein.
Length = 544
Score = 31.1 bits (67), Expect = 0.95
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 549 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 644
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 307 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 339
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 555 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 647
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 443 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 474
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 528 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 647
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 199 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 239
>AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated
protein 87, isoform a protein.
Length = 565
Score = 31.1 bits (67), Expect = 0.95
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 549 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 644
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 328 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 360
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 555 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 647
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 464 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 495
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 528 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 647
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 220 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 260
>AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated
protein 87, isoform b protein.
Length = 374
Score = 31.1 bits (67), Expect = 0.95
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 549 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 644
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 137 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 169
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 555 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 647
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 273 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 304
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 528 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 647
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 29 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 69
>U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical
protein C53C9.2 protein.
Length = 397
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 537 RNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 647
++ EE + +G++ LQ G+NK A+Q G+ FG R+
Sbjct: 241 KDIEEELKQKSEGIVPLQSGTNKLASQRGMTGFGTPRN 278
>U42844-6|AAB53814.1| 344|Caenorhabditis elegans Hypothetical
protein C08A9.6 protein.
Length = 344
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +2
Query: 215 EHLRGYGQLLRSA*RRHSSVQASQQHPPEHDQKDQHIVDGLQVHGEYQRFPRSRK 379
EHL + S + +S PP+ D QHI G QVH + ++P K
Sbjct: 244 EHLPDSSAKIYSTNIKSASCAPESTEPPKSDNSAQHI--GEQVHRLFAQYPERSK 296
>AC084153-10|AAK84591.1| 184|Caenorhabditis elegans Hypothetical
protein Y22D7AL.2 protein.
Length = 184
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = -3
Query: 538 RTFFSASFGPIDGFP*VPAFLPSDCKQITTELRFCLSHRSTV*KVSCAGTPNCLAASRKA 359
RT + SF G P V A S + T LR +H++T +C GTPN AAS+
Sbjct: 88 RTHQTTSFTSNCGTPNVSA--ASKQPPLHTSLR---THQTTSFTSNC-GTPNVSAASKNN 141
Query: 358 LIFSMH 341
+F++H
Sbjct: 142 HLFTLH 147
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 207 EPENTSGDMDNFYEVLKDGTLLCKL 281
E ++SG +++ +E ++DG LLC L
Sbjct: 38 EEHSSSGRIEDLFEDIRDGVLLCHL 62
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 207 EPENTSGDMDNFYEVLKDGTLLCKL 281
E ++SG +++ +E ++DG LLC L
Sbjct: 38 EEHSSSGRIEDLFEDIRDGVLLCHL 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,014,407
Number of Sequences: 27780
Number of extensions: 424355
Number of successful extensions: 1135
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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