Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_N07
(704 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15313-10|AAP68920.1| 355|Caenorhabditis elegans Hypothetical p... 121 6e-28
L15313-9|AAP68921.1| 357|Caenorhabditis elegans Hypothetical pr... 121 6e-28
AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical ... 31 0.80
AL031629-2|CAA20975.1| 248|Caenorhabditis elegans Hypothetical ... 29 2.4
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass... 29 3.2
AF125442-4|AAD12794.1| 317|Caenorhabditis elegans Serpentine re... 29 3.2
Z72506-7|CAA96620.2| 293|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z49132-12|CAA88990.3| 931|Caenorhabditis elegans Hypothetical p... 28 5.7
Z48716-7|CAA88602.3| 931|Caenorhabditis elegans Hypothetical pr... 28 5.7
U53147-2|AAA96114.2| 935|Caenorhabditis elegans Hypothetical pr... 28 5.7
AF353303-1|AAK32717.1| 367|Caenorhabditis elegans GATA-like tra... 28 5.7
AF100657-1|AAC68957.3| 367|Caenorhabditis elegans Erythroid-lik... 28 5.7
Z81079-5|CAB03082.2| 505|Caenorhabditis elegans Hypothetical pr... 28 7.5
AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical ... 28 7.5
AJ238443-1|CAB41469.1| 454|Caenorhabditis elegans TBP-like fact... 28 7.5
AF228692-1|AAF59926.1| 505|Caenorhabditis elegans TBP-like fact... 28 7.5
AL132948-35|CAC51060.2| 887|Caenorhabditis elegans Hypothetical... 27 9.9
AC006830-3|AAP13735.1| 348|Caenorhabditis elegans Serpentine re... 27 9.9
>L15313-10|AAP68920.1| 355|Caenorhabditis elegans Hypothetical
protein ZK353.1a protein.
Length = 355
Score = 121 bits (291), Expect = 6e-28
Identities = 66/136 (48%), Positives = 90/136 (66%), Gaps = 15/136 (11%)
Frame = +3
Query: 315 PEGEVSSNNIQHISEREPDDG-DIDPSQDPMAGTIFMERSKASIENGMTRKR-------- 467
P E S+N + HISERE +G + DPS +P A FMERSK+ ++ R+
Sbjct: 40 PRDETSTNFLPHISEREVTEGYEEDPSTNPTARPTFMERSKSEMKLKDNRRSCYMLDALA 99
Query: 468 --SQHQ-IADNKLKKSSSCSTIYLDDSTVSQPNLKNTVRCVALAIYYHI---KNRMSERR 629
H I L+KSSSCSTIY+DDSTVSQP+LKNT++C++LAIYYHI KNR ER
Sbjct: 100 AGGHHPGILPRSLRKSSSCSTIYIDDSTVSQPHLKNTIKCISLAIYYHISNRKNRGHERL 159
Query: 630 LDIFDEKLHPLSKEGV 677
++IF+E+LHP+ ++ +
Sbjct: 160 MEIFEERLHPIFRDPI 175
>L15313-9|AAP68921.1| 357|Caenorhabditis elegans Hypothetical
protein ZK353.1b protein.
Length = 357
Score = 121 bits (291), Expect = 6e-28
Identities = 66/136 (48%), Positives = 90/136 (66%), Gaps = 15/136 (11%)
Frame = +3
Query: 315 PEGEVSSNNIQHISEREPDDG-DIDPSQDPMAGTIFMERSKASIENGMTRKR-------- 467
P E S+N + HISERE +G + DPS +P A FMERSK+ ++ R+
Sbjct: 42 PRDETSTNFLPHISEREVTEGYEEDPSTNPTARPTFMERSKSEMKLKDNRRSCYMLDALA 101
Query: 468 --SQHQ-IADNKLKKSSSCSTIYLDDSTVSQPNLKNTVRCVALAIYYHI---KNRMSERR 629
H I L+KSSSCSTIY+DDSTVSQP+LKNT++C++LAIYYHI KNR ER
Sbjct: 102 AGGHHPGILPRSLRKSSSCSTIYIDDSTVSQPHLKNTIKCISLAIYYHISNRKNRGHERL 161
Query: 630 LDIFDEKLHPLSKEGV 677
++IF+E+LHP+ ++ +
Sbjct: 162 MEIFEERLHPIFRDPI 177
>AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical
protein C48E7.8 protein.
Length = 820
Score = 31.1 bits (67), Expect = 0.80
Identities = 17/77 (22%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +3
Query: 297 KLEDYLPEGEVSSNNIQHISEREPDDGDIDPSQDPM----AGTIFMERSKASIENGMTRK 464
++E ++ G+ + + E + D D+DPS++ G + ++RS + +
Sbjct: 744 RMERHVSFGDTEIEKYEVVEEGDVDGNDMDPSENTRQWIETGQLCLQRSDIDMLCAKQEE 803
Query: 465 RSQHQIADNKLKKSSSC 515
++ +I D+ K S+SC
Sbjct: 804 KANVKIEDDDGKTSTSC 820
>AL031629-2|CAA20975.1| 248|Caenorhabditis elegans Hypothetical
protein Y106G6D.2 protein.
Length = 248
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +3
Query: 453 MTRKRSQHQIADNKLKKSSSCSTIYLDDSTVSQPNLKNTVRCVALAIYYHIKNRMSERRL 632
+TRKR + ++ KK +Y D ++ + + NT+ L +N S+R+L
Sbjct: 74 VTRKRDTIRFTEHLKKKQEK---LYKDLESIKEDSKNNTIHGNVLRFRREYENEDSKRKL 130
Query: 633 DIFDEKLHPLSKE 671
D L L E
Sbjct: 131 DEMKNTLDQLKSE 143
>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily assigned
gene nameprotein 213 protein.
Length = 1437
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/89 (19%), Positives = 37/89 (41%)
Frame = +3
Query: 429 SKASIENGMTRKRSQHQIADNKLKKSSSCSTIYLDDSTVSQPNLKNTVRCVALAIYYHIK 608
SKA++E+G + Q + S + +D+ S+P ++ + A+++ +
Sbjct: 818 SKAAVEDGQKTRLDTQQKTEMFTSALESQVEMLMDELKASEPGMEENIPVKFFAVFWMLT 877
Query: 609 NRMSERRLDIFDEKLHPLSKEGVSDDYDK 695
E ++ L L K+ D + K
Sbjct: 878 MYDIEVPTAAYERTLDALKKQSREDSHGK 906
>AF125442-4|AAD12794.1| 317|Caenorhabditis elegans Serpentine
receptor, class v protein21 protein.
Length = 317
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 109 KVLWAFYVL-FLCRLIISVYLVVTQCV*NDNEHS 207
K W + + FLC I+ VY+++ C+ +HS
Sbjct: 18 KFYWNYLIYYFLCIAILPVYILIVACILKSRKHS 51
>Z72506-7|CAA96620.2| 293|Caenorhabditis elegans Hypothetical
protein F07A5.6 protein.
Length = 293
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 270 PSPIRKDIVKLEDYLPEGEVSSNNIQHISEREPDDGDIDPSQDPMAGT 413
P+P + + ED + E EV + E E DDG++ +DP+ T
Sbjct: 104 PTPDEPEFYEEED-VDESEVVEEDYAQEEEEEGDDGEVVEYEDPVVVT 150
>Z49132-12|CAA88990.3| 931|Caenorhabditis elegans Hypothetical
protein F59B10.1 protein.
Length = 931
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 2/97 (2%)
Frame = +3
Query: 306 DYLP--EGEVSSNNIQHISEREPDDGDIDPSQDPMAGTIFMERSKASIENGMTRKRSQHQ 479
DYL EG V + + GD+D D I ++ ++ + + +
Sbjct: 551 DYLTIDEGRVFYETVMATQQLCRMTGDLDSKIDEKVAEISRRLNEYAVRKKLASSMASNL 610
Query: 480 IADNKLKKSSSCSTIYLDDSTVSQPNLKNTVRCVALA 590
DNK S CS + SQP R + A
Sbjct: 611 NGDNKSLSYSRCSLTSTATNATSQPKRSRKHRAIKQA 647
>Z48716-7|CAA88602.3| 931|Caenorhabditis elegans Hypothetical
protein F59B10.1 protein.
Length = 931
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 2/97 (2%)
Frame = +3
Query: 306 DYLP--EGEVSSNNIQHISEREPDDGDIDPSQDPMAGTIFMERSKASIENGMTRKRSQHQ 479
DYL EG V + + GD+D D I ++ ++ + + +
Sbjct: 551 DYLTIDEGRVFYETVMATQQLCRMTGDLDSKIDEKVAEISRRLNEYAVRKKLASSMASNL 610
Query: 480 IADNKLKKSSSCSTIYLDDSTVSQPNLKNTVRCVALA 590
DNK S CS + SQP R + A
Sbjct: 611 NGDNKSLSYSRCSLTSTATNATSQPKRSRKHRAIKQA 647
>U53147-2|AAA96114.2| 935|Caenorhabditis elegans Hypothetical protein
C01B7.1a protein.
Length = 935
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 270 PSPIRKDIVKLEDYLPEGEVSSNNIQHISEREPDDGDIDPSQDP 401
P P R DI KL+ G++ I+ + E +DG +PS+ P
Sbjct: 879 PLPTRSDIEKLQILASGGDLKIGGIEKYLKEECEDG--EPSEAP 920
>AF353303-1|AAK32717.1| 367|Caenorhabditis elegans GATA-like
transcription factorELT-6 protein.
Length = 367
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +3
Query: 483 ADNKLKKSSSCSTIYLDDSTVSQPNLKNTVRCVALAIYY--HIKNRMSERRLDIFDEKLH 656
A++ + K S+CSTI +T + +L+ + C A +YY H +R R D ++
Sbjct: 258 ANSSISKCSNCSTI---KTTAWRRDLEGKLVCNACGLYYRLHRTHRPVHMRKDFIQQRFR 314
Query: 657 PLSKE 671
+E
Sbjct: 315 RRMRE 319
>AF100657-1|AAC68957.3| 367|Caenorhabditis elegans Erythroid-like
transcription factorfamily protein 6 protein.
Length = 367
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +3
Query: 483 ADNKLKKSSSCSTIYLDDSTVSQPNLKNTVRCVALAIYY--HIKNRMSERRLDIFDEKLH 656
A++ + K S+CSTI +T + +L+ + C A +YY H +R R D ++
Sbjct: 258 ANSSISKCSNCSTI---KTTAWRRDLEGKLVCNACGLYYRLHRTHRPVHMRKDFIQQRFR 314
Query: 657 PLSKE 671
+E
Sbjct: 315 RRMRE 319
>Z81079-5|CAB03082.2| 505|Caenorhabditis elegans Hypothetical
protein F39H11.2 protein.
Length = 505
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 267 SPSPIRKDIVKLEDYLPEGEVSSNNIQHISEREPDDGDID 386
SP PI I ++ D PEG ++N E PDDGDID
Sbjct: 231 SPEPIPVKI-EVPDVPPEGTSAANE-----EPMPDDGDID 264
>AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical
protein Y116A8C.13 protein.
Length = 833
Score = 27.9 bits (59), Expect = 7.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 374 WRHRSIARSDGWHHF 418
WRH S +D WHHF
Sbjct: 794 WRHFSPRHADTWHHF 808
>AJ238443-1|CAB41469.1| 454|Caenorhabditis elegans TBP-like factor
protein.
Length = 454
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 267 SPSPIRKDIVKLEDYLPEGEVSSNNIQHISEREPDDGDID 386
SP PI I ++ D PEG ++N E PDDGDID
Sbjct: 231 SPEPIPVKI-EVPDVPPEGTSAANE-----EPMPDDGDID 264
>AF228692-1|AAF59926.1| 505|Caenorhabditis elegans TBP-like factor
protein.
Length = 505
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 267 SPSPIRKDIVKLEDYLPEGEVSSNNIQHISEREPDDGDID 386
SP PI I ++ D PEG ++N E PDDGDID
Sbjct: 231 SPEPIPVKI-EVPDVPPEGTSAANE-----EPMPDDGDID 264
>AL132948-35|CAC51060.2| 887|Caenorhabditis elegans Hypothetical
protein Y39B6A.47 protein.
Length = 887
Score = 27.5 bits (58), Expect = 9.9
Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 8/112 (7%)
Frame = +3
Query: 225 CKIMGNQNSCCCY---RSPSPIRKDIVK-LEDYLPEGEVS---SNNIQHISEREPDDGDI 383
C++ G S C Y I D K + DY P I + E EP
Sbjct: 49 CQLEGGGRSMCRYCRFEKCKEIGMDAEKVILDYDPTASQKVPVMPKIDKVQENEPAPATS 108
Query: 384 DPSQDPMAGTI-FMERSKASIENGMTRKRSQHQIADNKLKKSSSCSTIYLDD 536
D + I F E ++ E T+KRS +++ + SS ++YL+D
Sbjct: 109 KSHADKITVKIDFTELTEKLKEMFETQKRSSGELSGSLDSDESSTDSVYLND 160
>AC006830-3|AAP13735.1| 348|Caenorhabditis elegans Serpentine
receptor, class w protein3 protein.
Length = 348
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -1
Query: 215 DYKECSLSFYTHCVTTRYTEIISRHRNKT*KAXXTLACLICGIC*C 78
+Y C L F+ + + I++R ++ ++ CL+CGIC C
Sbjct: 19 NYVICILQFFGFGINLIHFSILTRKHMRS----NSIYCLMCGICAC 60
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,871,764
Number of Sequences: 27780
Number of extensions: 334083
Number of successful extensions: 943
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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