Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_N06
         (709 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   1.8  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   4.3  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   4.3  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   4.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.8  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    21   9.8  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   9.8  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   9.8  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 7/27 (25%), Positives = 17/27 (62%)
 Frame = -2

Query: 708 YSIFFL*AXSSSVCSDANNGTLIAAGM 628
           + +F+L   +S +C++AN   ++  G+
Sbjct: 204 FDLFYLSKRASDLCNEANKTKILLVGL 230



 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = -2

Query: 657 NNGTLIAAGMFSILSLITRPVC*ESSARIYLINSLVLGS 541
           N   + A  +FSI + +   +C  +S+ ++++  L +GS
Sbjct: 253 NKLEITACRLFSIDNALLFSICGAASSYLFIMLQLDIGS 291


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 528 DSFVSNSLICATLGSFFLLV 469
           D ++   L+C  LG F L++
Sbjct: 100 DQYLLEQLVCEQLGGFLLIL 119


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 294 SSCLIPWKSLSSGLRPSKSACSS 226
           S C+  W+S  S LRP  S  S+
Sbjct: 225 SICIEIWQSSESSLRPRSSQKSA 247


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = -2

Query: 339 ASPPRSTFDFRNSCLSSCLIPWKSLSSGLRPSKSACSSFSPT*LPSESKSESFS 178
           +SP  ++  + NS  SS   P    S  L   +S CSS  P    + S +  ++
Sbjct: 201 SSPTIASATYTNSANSSIWSPASIDSFTLEQHRSWCSSSQPVLSTTNSTTNCYN 254


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 233 VALFHRHSCRLNQN 192
           VA+F R  C +N+N
Sbjct: 201 VAMFSRKPCSINEN 214


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 233 VALFHRHSCRLNQN 192
           VA+F R  C +N+N
Sbjct: 201 VAMFSRKPCSINEN 214


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -3

Query: 272 SHYLLGYVLRNQPVALFHRHSCRLN 198
           S +++GYV    P+AL ++++   N
Sbjct: 39  SPFVIGYVKHFHPLALSNKNAIDFN 63


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 133 FLVLFIRHFSKINKR 89
           FL LF+ H+  IN++
Sbjct: 232 FLQLFLEHYEVINRQ 246


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 133 FLVLFIRHFSKINKR 89
           FL LF+ H+  IN++
Sbjct: 158 FLQLFLEHYEVINRQ 172


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,271
Number of Sequences: 336
Number of extensions: 2543
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)