Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_N06
(709 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC613.08 |||CDK regulator |Schizosaccharomyces pombe|chr 3|||M... 78 1e-15
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 34 0.017
SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pomb... 33 0.040
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 32 0.070
SPAC1071.08 |rpp203|rpp2-3, rla6|60S acidic ribosomal protein P2... 31 0.21
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 30 0.28
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 30 0.37
SPAC1071.11 |||NADH-dependent flavin oxidoreductase |Schizosacch... 29 0.86
SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|... 28 1.5
SPAC1486.09 |||ribosome biogenesis protein Nob1 |Schizosaccharom... 28 1.5
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 27 2.0
SPAC3H1.04c |mdm31||mitochondrial inner membrane protein Mdm31|S... 27 2.0
SPBC365.15 |alp4||gamma tubulin complex Spc97/GCP2 subunit Alp4|... 27 2.6
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 3.5
SPCC320.14 ||SPCC330.15c|threo-3-hydroxyaspartate ammonia-lyase ... 27 3.5
SPAC6B12.13 |||protein phosphatase inhibitor |Schizosaccharomyce... 26 4.6
SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex lar... 26 4.6
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 4.6
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 26 4.6
SPBC646.12c |gap1|src1, sar1|GTPase activating protein Gap1|Schi... 26 4.6
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 4.6
SPAC29A4.09 |||rRNA processing protein Rrp17|Schizosaccharomyces... 26 4.6
SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces p... 26 6.1
SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit |... 26 6.1
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 25 8.0
SPBC23G7.15c |rpp202|rpp2-2|60S acidic ribosomal protein P2B sub... 25 8.0
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 25 8.0
>SPCC613.08 |||CDK regulator |Schizosaccharomyces pombe|chr
3|||Manual
Length = 325
Score = 77.8 bits (183), Expect = 1e-15
Identities = 48/163 (29%), Positives = 86/163 (52%), Gaps = 3/163 (1%)
Frame = +2
Query: 230 LQADFEGRNPEDSDFHGIKQLLRQL--FLKSNVDLGGLAQIIISQNYIGSVVKQCLXXXX 403
+ DFE +P+ DFH K LL+QL + +NV+L LA +I+SQ +GS VK
Sbjct: 69 INVDFEFFDPQPIDFHAFKNLLKQLLGYDHTNVNLSALADLILSQPLLGSTVK------- 121
Query: 404 XXXXXXXXXXXXVFGVTTVVNITKRKNEPSVAQIRE-LLTKLSQENADPRTKELIKYILA 580
+ + +V+N+ R++EP + Q+ ++++L++ N+ EL K +
Sbjct: 122 -----VDGNNSDPYAMLSVINLNTRRDEPVIKQLTSYIISRLAKSNSRLEN-ELQKLLEP 175
Query: 581 DDSQHTGLVINERILNIPAAISVPLFASLQTELXKAHRKNMLY 709
+ GL++NER++N+P + P++ L E+ A +N Y
Sbjct: 176 NSGSQVGLIVNERLINMPVQVIPPMYNMLLEEMQWAINENEPY 218
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 34.3 bits (75), Expect = 0.017
Identities = 18/60 (30%), Positives = 38/60 (63%), Gaps = 5/60 (8%)
Frame = +2
Query: 107 KMPNKK----NKEIDTNSES-EKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 271
++P KK +++ +++SES E+E+++ SE+DS+ + E E +++ E + E+SD
Sbjct: 68 EVPKKKAVAASEDSESDSESSEEEEETESEEDSEVSDESESESESESESEEESESEEESD 127
>SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1254
Score = 33.1 bits (72), Expect = 0.040
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 92 FVYFAKMPNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGN 211
F +F+K+PN K ++ D+ S DS + +D D+ N
Sbjct: 26 FGFFSKIPNVKQEKSDSTLSSSSNHDSNHDTPADVDNSSN 65
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 32.3 bits (70), Expect = 0.070
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +2
Query: 134 IDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFHG 280
+ +++ E+E++ E + +FD +G E+E + D +G D D G
Sbjct: 170 VQPDADEEEEEEEADEMEEEFDEEGEGDEEEEEEDDGDGDGEGDGDGEG 218
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +2
Query: 116 NKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPE 262
++ +E D E ++E++ + D D + DG+ GE + + E E
Sbjct: 184 DEMEEEFDEEGEGDEEEEEEDDGDGDGEGDGDGEGENDGKGSEEEEEEE 232
>SPAC1071.08 |rpp203|rpp2-3, rla6|60S acidic ribosomal protein P2C
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 110
Score = 30.7 bits (66), Expect = 0.21
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +2
Query: 479 KNEPSVAQIRELLTKLSQENADPRTKELIKYILADDSQHTGLVINERILNIPA 637
KN PS + I +L+ + E+ R + LIK + D NE++ +P+
Sbjct: 15 KNSPSASDIESVLSTVGIESESERVEALIKELDGKDIDELIAAGNEKLATVPS 67
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 30.3 bits (65), Expect = 0.28
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 7/68 (10%)
Frame = +2
Query: 131 EIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQAD--FEGR--NPEDSDFH--GIKQ- 289
+I T+++ +K ++ G E SD D DGNY+ K L+++ +G+ N + S+F G+ Q
Sbjct: 22 DIATDNQKDKHENVG-ENVSDED-DGNYIASKLLESNRRTKGKKGNGKASNFQSMGLNQT 79
Query: 290 LLRQLFLK 313
LLR +F K
Sbjct: 80 LLRAIFKK 87
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 29.9 bits (64), Expect = 0.37
Identities = 13/56 (23%), Positives = 31/56 (55%)
Frame = +2
Query: 131 EIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFHGIKQLLR 298
E+D + ++K++D + ++++ ++D N E++ + D E ED G ++ R
Sbjct: 84 EVDNVNNNDKKEDEDNVEENEEEADANEEEEEDEEDDEEDEEDEDESGGGRRKRAR 139
>SPAC1071.11 |||NADH-dependent flavin oxidoreductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 244
Score = 28.7 bits (61), Expect = 0.86
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -3
Query: 281 YRGSHYLLGYVLRNQPVALFHRHSCRLNQNQNLFRCL 171
+ S L Y+LR+ P + F+R+S + N N FR L
Sbjct: 9 FTSSSSLPCYILRHLPFSNFNRYSTASHDNVNAFRLL 45
>SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 699
Score = 27.9 bits (59), Expect = 1.5
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +2
Query: 131 EIDTNSESEKEQDS---GSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFHGIKQLLRQ 301
E+D NSESE+++ G K+ D Y EK + N E + Q++ Q
Sbjct: 416 ELDDNSESEEDEHGMTIGFSKELKAPPDPQYFTEKTGATTYVNGNDESLNVSDFPQIVEQ 475
Query: 302 LFLKS 316
L S
Sbjct: 476 EELSS 480
>SPAC1486.09 |||ribosome biogenesis protein Nob1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 388
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 116 NKKNKEIDTNSESEKEQDSGSEKDSD 193
+ NKE N+E KEQ+ E D D
Sbjct: 163 HSNNKEAHPNTEENKEQEDNEEDDED 188
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 146 SESEKEQDSGSEKDSDFDSD 205
SESE+E+ S SE D D D D
Sbjct: 239 SESEEEESSESESDEDEDED 258
>SPAC3H1.04c |mdm31||mitochondrial inner membrane protein
Mdm31|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 27.5 bits (58), Expect = 2.0
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +2
Query: 104 AKMPNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFHGI 283
A+ PN K+ K DS E D++ S GNY + EL D + + F
Sbjct: 221 AQNPNNKSDYEKEYMALRKRYDSNEEPDTEALSQGNYT-QFELSIDKADVSFSFARFLNG 279
Query: 284 KQLLRQLFLK 313
K ++++L LK
Sbjct: 280 KGIVKELQLK 289
>SPBC365.15 |alp4||gamma tubulin complex Spc97/GCP2 subunit
Alp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 27.1 bits (57), Expect = 2.6
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +2
Query: 449 VTTVVNITKRKNEPSVA-QIRELLTK-LSQENADPRTKELIKYILADDSQHTGLVINERI 622
++ VVN T+ K + Q+ LT+ L++ DP ++++ Y+L + S+ ++NE I
Sbjct: 239 ISHVVNATRSKKKVCKGGQVISFLTESLTKYAGDPVARKILTYLLREASRPYTKMLNEWI 298
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/55 (21%), Positives = 24/55 (43%)
Frame = +2
Query: 107 KMPNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 271
K+ KK D++SES + S+ + + V + E + + + DS+
Sbjct: 155 KIEEKKESSSDSSSESSSSESESESSSSESEEEEEVVEKTEEKKEGSSESSSDSE 209
>SPCC320.14 ||SPCC330.15c|threo-3-hydroxyaspartate ammonia-lyase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 323
Score = 26.6 bits (56), Expect = 3.5
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 500 QIRELLTKLSQENADPRTKELIKYILADDSQHTGLVINERILNIPAAISVPLFA 661
+ R L LSQ N R ++ + + +Q + ++ +IL IPA I +PL A
Sbjct: 57 KFRGALNALSQLNEAQRKAGVLTFSSGNHAQ--AIALSAKILGIPAKIIMPLDA 108
>SPAC6B12.13 |||protein phosphatase inhibitor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 104
Score = 26.2 bits (55), Expect = 4.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 83 TSSFVYFAKMPNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGN 211
T S V M KK+K + K +S S+ DSD DSD +
Sbjct: 49 TVSTVDNEHMNKKKSKVCCIFHKQRKFDESSSDSDSDSDSDSS 91
>SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex large
subunit Nuc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1689
Score = 26.2 bits (55), Expect = 4.6
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 10/89 (11%)
Frame = +2
Query: 101 FAKMPNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEG-RNPEDSDF- 274
F + K ++ ++ + +D G + DSD ++ G + D +N S
Sbjct: 258 FMEQTGKIRSDVLRDTSKKHHEDEGYDGDSDSSNESEVEGIDLFEEDPNPLKNKSKSPIA 317
Query: 275 HGIKQL--------LRQLFLKSNVDLGGL 337
HG K + LR+LF+K NV L L
Sbjct: 318 HGAKYMTSTEVRNHLRRLFVKENVVLSRL 346
>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 867
Score = 26.2 bits (55), Expect = 4.6
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = +2
Query: 137 DTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFHGIKQLLRQLFL 310
D E E + D ++D D D D N L + +F +K+ L QL++
Sbjct: 200 DDEVEEEDDDDDDEDEDEDEDEDNNNNNRWLLIEQYPSDIVAYENFVSLKRKLTQLYV 257
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 26.2 bits (55), Expect = 4.6
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 152 SEKEQDSGSEKDSDFDSDG-NYVGEKELQADFEGRN 256
+E + GSE DSD DSD + V +LQ + RN
Sbjct: 434 NEPSDEIGSENDSDSDSDSDSSVPLSQLQKKSQQRN 469
>SPBC646.12c |gap1|src1, sar1|GTPase activating protein
Gap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 766
Score = 26.2 bits (55), Expect = 4.6
Identities = 10/28 (35%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -2
Query: 519 VSNSLICATLGSFFLL-VIFTTVVTPKT 439
+S+S IC+ +G FF L + +++P+T
Sbjct: 324 ISDSTICSLIGGFFFLRFVNPAIISPQT 351
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 4.6
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +2
Query: 101 FAKMPNKKNKEIDTN----SESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEG 250
F PN K+ ++ + S+S K S E +S FD G + + +ADF G
Sbjct: 85 FLAPPNDKDSPVNQSPWKRSDSSKRSSSQDEFESLFDRYGQLSLKDDGKADFRG 138
>SPAC29A4.09 |||rRNA processing protein Rrp17|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 26.2 bits (55), Expect = 4.6
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 125 NKEIDTNSESEKEQDSGSEKDSDFDS 202
N ++ + ES +++DS S+ DS+ +S
Sbjct: 90 NSSLENDEESSQQEDSSSKSDSEEES 115
>SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 608
Score = 25.8 bits (54), Expect = 6.1
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 149 ESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFHGIKQLLRQL 304
+ E ++ G E+DS FDSD + K + +D G + ED + ++ + R+L
Sbjct: 96 DDEAKECEGEEEDSVFDSDEEH-EVKPMFSDDSG-DEEDLELANMEAMSRKL 145
>SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 661
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +2
Query: 455 TVVNITKRKNEPSVAQIRELLTKLSQENADPRTKELIKYILADDSQH 595
T N+ N PSV + ++ NAD + E IK ++ +S +
Sbjct: 358 TADNMNTWDNTPSVENVESANENVNNHNADEQMDEKIKSLVEGNSAY 404
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 25.4 bits (53), Expect = 8.0
Identities = 10/50 (20%), Positives = 23/50 (46%)
Frame = +2
Query: 119 KKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDS 268
K++ + D + ++D E ++ DG + +Q++ + NP S
Sbjct: 278 KESLDADKELATNDQEDDEEENQAETQKDGAISNNENMQSEVQTTNPSAS 327
>SPBC23G7.15c |rpp202|rpp2-2|60S acidic ribosomal protein P2B
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 110
Score = 25.4 bits (53), Expect = 8.0
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +2
Query: 479 KNEPSVAQIRELLTKLSQENADPRTKELIKYILADDSQHTGLVINERILNIPAAISV 649
K PS + I +L+ + E R + LI + + + NE++ +P+A +V
Sbjct: 15 KQSPSASDIESVLSTVGIEAEAERVESLISELNGKNIEELIAAGNEKLSTVPSAGAV 71
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7
domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1811
Score = 25.4 bits (53), Expect = 8.0
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +2
Query: 116 NKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPED 265
++ + EID + +S EQ S +EK + + D N EK+++++ R PED
Sbjct: 37 SRVSDEIDEH-DSIPEQ-SNTEKSIEIN-DKNLEAEKDIESNLSLRPPED 83
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,358,028
Number of Sequences: 5004
Number of extensions: 42834
Number of successful extensions: 226
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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