Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_N05
         (688 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprote...    26   0.97 
AY341174-1|AAR13738.1|  280|Anopheles gambiae fibrinogen protein.      24   5.2  
AY341173-1|AAR13737.1|  280|Anopheles gambiae fibrinogen protein.      24   5.2  
AY341172-1|AAR13736.1|  280|Anopheles gambiae fibrinogen protein.      24   5.2  
AY341171-1|AAR13735.1|  280|Anopheles gambiae fibrinogen protein.      24   5.2  
AY341170-1|AAR13734.1|  280|Anopheles gambiae fibrinogen protein.      24   5.2  
AY341169-1|AAR13733.1|  280|Anopheles gambiae fibrinogen protein.      24   5.2  
AY341168-1|AAR13732.1|  280|Anopheles gambiae fibrinogen protein.      24   5.2  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   6.8  

>AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprotein
           protein.
          Length = 470

 Score = 26.2 bits (55), Expect = 0.97
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 220 IHLYISVGSSFLLTFCDRIIFAIFVLNL 137
           IH+ I  G +FL+TF  R  F+   LNL
Sbjct: 65  IHVMIFAGFAFLMTFLKRYGFSASGLNL 92


>AY341174-1|AAR13738.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -1

Query: 463 VIELSSMSALGPINISFSCKNSPFTFTGKYSIFSNSE 353
           + EL  M   GP     SC++ P   +GKY + ++++
Sbjct: 95  LFELQGMRHKGPFE---SCRDEPSKMSGKYLLRASND 128


>AY341173-1|AAR13737.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -1

Query: 463 VIELSSMSALGPINISFSCKNSPFTFTGKYSIFSNSE 353
           + EL  M   GP     SC++ P   +GKY + ++++
Sbjct: 95  LFELQGMRHKGPFE---SCRDEPSKMSGKYLLRASND 128


>AY341172-1|AAR13736.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -1

Query: 463 VIELSSMSALGPINISFSCKNSPFTFTGKYSIFSNSE 353
           + EL  M   GP     SC++ P   +GKY + ++++
Sbjct: 95  LFELQGMRHKGPFE---SCRDEPSKMSGKYLLRASND 128


>AY341171-1|AAR13735.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -1

Query: 463 VIELSSMSALGPINISFSCKNSPFTFTGKYSIFSNSE 353
           + EL  M   GP     SC++ P   +GKY + ++++
Sbjct: 95  LFELQGMRHKGPFE---SCRDEPSKMSGKYLLRASND 128


>AY341170-1|AAR13734.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -1

Query: 463 VIELSSMSALGPINISFSCKNSPFTFTGKYSIFSNSE 353
           + EL  M   GP     SC++ P   +GKY + ++++
Sbjct: 95  LFELQGMRHKGPFE---SCRDEPSKMSGKYLLRASND 128


>AY341169-1|AAR13733.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -1

Query: 463 VIELSSMSALGPINISFSCKNSPFTFTGKYSIFSNSE 353
           + EL  M   GP     SC++ P   +GKY + ++++
Sbjct: 95  LFELQGMRHKGPFE---SCRDEPSKMSGKYLLRASND 128


>AY341168-1|AAR13732.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -1

Query: 463 VIELSSMSALGPINISFSCKNSPFTFTGKYSIFSNSE 353
           + EL  M   GP     SC++ P   +GKY + ++++
Sbjct: 95  LFELQGMRHKGPFE---SCRDEPSKMSGKYLLRASND 128


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 415  FSCKNSPFTFTGKYSIFSN 359
            +SC ++PF F  +Y +F++
Sbjct: 1050 WSCVSTPFFFLDEYDVFTD 1068


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,430
Number of Sequences: 2352
Number of extensions: 11394
Number of successful extensions: 26
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)