Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_N05
(688 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006651-9|AAF39867.1| 323|Caenorhabditis elegans Surfeit homol... 127 8e-30
Z68134-4|CAA92224.1| 567|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z49207-7|CAA89072.1| 512|Caenorhabditis elegans Hypothetical pr... 29 4.1
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 4.1
AL023811-1|CAA19422.2| 947|Caenorhabditis elegans Hypothetical ... 29 4.1
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 29 4.1
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 4.1
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 4.1
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 29 4.1
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 4.1
Z82051-10|CAB04822.2| 577|Caenorhabditis elegans Hypothetical p... 28 7.2
AL021175-11|CAA15973.2| 577|Caenorhabditis elegans Hypothetical... 28 7.2
AC006831-1|AAF39995.1| 558|Caenorhabditis elegans Hypothetical ... 28 7.2
Z74026-3|CAA98418.1| 457|Caenorhabditis elegans Hypothetical pr... 27 9.5
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF183390-1|AAF97864.1| 457|Caenorhabditis elegans Rh-like prote... 27 9.5
AF016443-1|AAC24277.1| 366|Caenorhabditis elegans Hypothetical ... 27 9.5
>AC006651-9|AAF39867.1| 323|Caenorhabditis elegans Surfeit homolog
protein 1 protein.
Length = 323
Score = 127 bits (306), Expect = 8e-30
Identities = 65/159 (40%), Positives = 100/159 (62%), Gaps = 4/159 (2%)
Frame = +3
Query: 219 ILLMIPVTSFTLGSWQVYRWQWKLGLIDMMQAKSNAVPIDMPKDFS--ELEKMEYLPVKV 392
++L IPV +F+LG WQ +R +WKL LI+ ++ + N ++P+D S LE +EY V V
Sbjct: 87 LMLTIPVFAFSLGIWQTFRLKWKLDLIEHLKGRLNQTAQELPEDLSCESLEPLEYCRVTV 146
Query: 393 KGEFLHEKEILIGPRALIEESSITNRV-GSLVSDPK-KNQGWLVITPFKLADTGEVILIN 566
GEFLHEKE +I PR + T+ GS++S+ + + G +ITPF+L ++G++ILIN
Sbjct: 147 TGEFLHEKEFIISPRGRFDPGKKTSAAAGSMLSENEMSSHGGHLITPFRLKNSGKIILIN 206
Query: 567 RGWIHQNLRPKEKREPSLIKGPVELTGVVRLTEKRAPFM 683
RGW+ E R+ + +G + L +VR TEKR F+
Sbjct: 207 RGWLPSFYFDPETRQKTNPRGTLTLPAIVRKTEKRPQFV 245
>Z68134-4|CAA92224.1| 567|Caenorhabditis elegans Hypothetical
protein T27A8.5 protein.
Length = 567
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +3
Query: 375 YLPVKVKGEFLHEKEILIGPRALIEESSITNRVGSLVSDPKKNQGWLVITPFKLADTGEV 554
Y+P+ + F +E + +++++ ++ N V SL+ D KN+ V +KL +
Sbjct: 487 YIPI-AQQFFQRFREFAVAGFSMLDKETVRNYVESLLRDMMKNKLDRVRRVYKLTHGEDS 545
Query: 555 ILINRGWIHQNL 590
I + W+ + L
Sbjct: 546 IRVKTRWMKEEL 557
>Z49207-7|CAA89072.1| 512|Caenorhabditis elegans Hypothetical
protein R07E3.5a protein.
Length = 512
Score = 28.7 bits (61), Expect = 4.1
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Frame = +3
Query: 219 ILLMIPVTSFTLGSWQ------VYRWQWKLGLIDMMQAKSNAVPIDMPKDFSELEKMEYL 380
+L+ + VT TLG + VY ++W L + + + +V DMP+DF +
Sbjct: 12 LLIFLAVTGKTLGLREYYVNTLVYIFEWGATLNEQYEEEEGSVEEDMPEDFQHKKPRRSS 71
Query: 381 PVKVKGEFLHEKEILIGPRALIEESSITNRVGSLVS 488
G EK +I A + E+++ + VS
Sbjct: 72 SASDLGIINREKSDIID--AKLHETNVPEAKQTTVS 105
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = -1
Query: 424 NISFSCKNSPF-TFTGKYSIFSNSEKSFGMSIGTALDLACIMSMSPSFHCHLYTCHEPRV 248
N + K F T G+ +F+ ++ +SIG L L+C + SP H Y+ E
Sbjct: 3069 NTEGTSKTEAFLTVQGEAPVFTKELQNKELSIGEKLVLSCSVKGSPQPHVDFYSFSE-TT 3127
Query: 247 KEVTGIISKIHLYI 206
K T I S + I
Sbjct: 3128 KVETKITSSSRIAI 3141
>AL023811-1|CAA19422.2| 947|Caenorhabditis elegans Hypothetical
protein C51F7.1 protein.
Length = 947
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 151 ILQILCDHRRSKEKKNRLKYTNGSY 225
ILQ+L +HR+S+ + N + TNG Y
Sbjct: 788 ILQLLKEHRQSQGQLNAITMTNGIY 812
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = -1
Query: 424 NISFSCKNSPF-TFTGKYSIFSNSEKSFGMSIGTALDLACIMSMSPSFHCHLYTCHEPRV 248
N + K F T G+ +F+ ++ +SIG L L+C + SP H Y+ E
Sbjct: 2429 NTEGTSKTEAFLTVQGEAPVFTKELQNKELSIGEKLVLSCSVKGSPQPHVDFYSFSE-TT 2487
Query: 247 KEVTGIISKIHLYI 206
K T I S + I
Sbjct: 2488 KVETKITSSSRIAI 2501
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = -1
Query: 424 NISFSCKNSPF-TFTGKYSIFSNSEKSFGMSIGTALDLACIMSMSPSFHCHLYTCHEPRV 248
N + K F T G+ +F+ ++ +SIG L L+C + SP H Y+ E
Sbjct: 3069 NTEGTSKTEAFLTVQGEAPVFTKELQNKELSIGEKLVLSCSVKGSPQPHVDFYSFSE-TT 3127
Query: 247 KEVTGIISKIHLYI 206
K T I S + I
Sbjct: 3128 KVETKITSSSRIAI 3141
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = -1
Query: 424 NISFSCKNSPF-TFTGKYSIFSNSEKSFGMSIGTALDLACIMSMSPSFHCHLYTCHEPRV 248
N + K F T G+ +F+ ++ +SIG L L+C + SP H Y+ E
Sbjct: 3069 NTEGTSKTEAFLTVQGEAPVFTKELQNKELSIGEKLVLSCSVKGSPQPHVDFYSFSE-TT 3127
Query: 247 KEVTGIISKIHLYI 206
K T I S + I
Sbjct: 3128 KVETKITSSSRIAI 3141
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = -1
Query: 424 NISFSCKNSPF-TFTGKYSIFSNSEKSFGMSIGTALDLACIMSMSPSFHCHLYTCHEPRV 248
N + K F T G+ +F+ ++ +SIG L L+C + SP H Y+ E
Sbjct: 2429 NTEGTSKTEAFLTVQGEAPVFTKELQNKELSIGEKLVLSCSVKGSPQPHVDFYSFSE-TT 2487
Query: 247 KEVTGIISKIHLYI 206
K T I S + I
Sbjct: 2488 KVETKITSSSRIAI 2501
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = -1
Query: 424 NISFSCKNSPF-TFTGKYSIFSNSEKSFGMSIGTALDLACIMSMSPSFHCHLYTCHEPRV 248
N + K F T G+ +F+ ++ +SIG L L+C + SP H Y+ E
Sbjct: 3069 NTEGTSKTEAFLTVQGEAPVFTKELQNKELSIGEKLVLSCSVKGSPQPHVDFYSFSE-TT 3127
Query: 247 KEVTGIISKIHLYI 206
K T I S + I
Sbjct: 3128 KVETKITSSSRIAI 3141
>Z82051-10|CAB04822.2| 577|Caenorhabditis elegans Hypothetical
protein T23D5.2 protein.
Length = 577
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +3
Query: 57 FNNIFKISRNLNIISNTFIKKGSVSNVRFNTNIANIMRSQKVKRKEEPTEIYKWILLMI 233
+ NIF+I ++ + N +K SVS N + + K KRKE E+ KW+ L +
Sbjct: 312 YTNIFRIYLSILVKQNK--RKRSVSQESSNKTVVS-----KSKRKELAEEVEKWMNLRV 363
>AL021175-11|CAA15973.2| 577|Caenorhabditis elegans Hypothetical
protein T23D5.2 protein.
Length = 577
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +3
Query: 57 FNNIFKISRNLNIISNTFIKKGSVSNVRFNTNIANIMRSQKVKRKEEPTEIYKWILLMI 233
+ NIF+I ++ + N +K SVS N + + K KRKE E+ KW+ L +
Sbjct: 312 YTNIFRIYLSILVKQNK--RKRSVSQESSNKTVVS-----KSKRKELAEEVEKWMNLRV 363
>AC006831-1|AAF39995.1| 558|Caenorhabditis elegans Hypothetical
protein ZK121.2 protein.
Length = 558
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 9/71 (12%)
Frame = -1
Query: 418 SFSCKNSPFTFTGKYSIFSNSEKSFGMSIG-------TALDLACIMSMSPSFHCHLYTCH 260
SF C N+ + TGK+ + +E GM+ G ++ + C S H H + H
Sbjct: 344 SFDCSNNSYLCTGKHPMMRKAESFGGMANGISHGCYEQSVPVVCGTPPSVMVHHHHHHAH 403
Query: 259 --EPRVKEVTG 233
+P TG
Sbjct: 404 IQQPPTSNYTG 414
>Z74026-3|CAA98418.1| 457|Caenorhabditis elegans Hypothetical
protein B0240.1 protein.
Length = 457
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 232 IISKIHLYISVGSSFLLTFCDRIIFAIFVLNLTL 131
+ +HL I VG FL+ F R F+ +NL L
Sbjct: 49 LFQDVHLMIFVGFGFLMAFLKRYGFSAVSVNLLL 82
>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical
protein F30H5.3 protein.
Length = 1599
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 260 MASVQMAMEAGAH*HDAS*IQCCPNR 337
MA+V+ AME H AS CCPNR
Sbjct: 303 MANVKTAMEGVYDIHPASDGICCPNR 328
>AF183390-1|AAF97864.1| 457|Caenorhabditis elegans Rh-like
protein-1 protein.
Length = 457
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 232 IISKIHLYISVGSSFLLTFCDRIIFAIFVLNLTL 131
+ +HL I VG FL+ F R F+ +NL L
Sbjct: 49 LFQDVHLMIFVGFGFLMAFLKRYGFSAVSVNLLL 82
>AF016443-1|AAC24277.1| 366|Caenorhabditis elegans Hypothetical
protein C17E7.5 protein.
Length = 366
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 520 ITNHPWFFFGSDTSEPTLLVIELSS 446
ITNH W FFG TS L+ ++ S
Sbjct: 169 ITNHEWSFFGIYTSIEFLMSLDFMS 193
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,609,966
Number of Sequences: 27780
Number of extensions: 296658
Number of successful extensions: 859
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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