Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_N04
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    25   0.57 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.0  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   5.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.0  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.0  

>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 361 LSKLCNADTSTNKCTCTVKWNIQ 293
           L ++CN + + NKC  + K  +Q
Sbjct: 46  LQRICNGEVAVNKCEGSCKSQVQ 68


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 165 KLD*VFIDILLITLGLNYMVISEQSDFN 248
           KLD +F  I L+T+GL Y  + E S  N
Sbjct: 444 KLDFIFTFITLLTIGL-YFQLCEFSRLN 470


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/37 (21%), Positives = 19/37 (51%)
 Frame = +1

Query: 22  VCLFFHLRTYPYNFIYVCKLSFYIHGFCTLVIFTENI 132
           +C+++    +    +++  L    H FC  +IFT ++
Sbjct: 144 LCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHL 180


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 5/22 (22%), Positives = 13/22 (59%)
 Frame = +1

Query: 55  YNFIYVCKLSFYIHGFCTLVIF 120
           YN +Y C++  Y++     +++
Sbjct: 330 YNILYFCRIMVYLNSAINPILY 351


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +2

Query: 8    PICLVFVYFFT*ERIPIISYMYVNYRSIFTVS-VLSS 115
            PI LVFV+FF    I +I ++ + +    T++ +L+S
Sbjct: 1325 PIGLVFVFFFA--LILVIQFVAMLFHRFGTIAHILAS 1359


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +2

Query: 8    PICLVFVYFFT*ERIPIISYMYVNYRSIFTVS-VLSS 115
            PI LVFV+FF    I +I ++ + +    T++ +L+S
Sbjct: 1325 PIGLVFVFFFA--LILVIQFVAMLFHRFGTIAHILAS 1359


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +2

Query: 8    PICLVFVYFFT*ERIPIISYMYVNYRSIFTVS-VLSS 115
            PI LVFV+FF    I +I ++ + +    T++ +L+S
Sbjct: 1325 PIGLVFVFFFA--LILVIQFVAMLFHRFGTIAHILAS 1359


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +2

Query: 8    PICLVFVYFFT*ERIPIISYMYVNYRSIFTVS-VLSS 115
            PI LVFV+FF    I +I ++ + +    T++ +L+S
Sbjct: 1325 PIGLVFVFFFA--LILVIQFVAMLFHRFGTIAHILAS 1359


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +3

Query: 90  YSRFLYSRHIYGKYTTRIKSFY 155
           YS F Y  +IY  Y+ ++   +
Sbjct: 85  YSYFFYLSYIYTTYSRKLSGIF 106


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +3

Query: 90  YSRFLYSRHIYGKYTTRIKSFY 155
           YS F Y  +IY  Y+ ++   +
Sbjct: 41  YSYFFYLSYIYTTYSRKLSGIF 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,978
Number of Sequences: 336
Number of extensions: 3712
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)