Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_N02
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   2.4  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   2.4  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   7.3  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   7.3  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   7.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.6  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
 Frame = +2

Query: 374 SPVMIVKEQALFEKNLKPEEYIN-----KLQEILYDDVFMTYGEHPRLLEVISQFIGDDI 538
           S V ++ ++A+FE   +    +      +L+ ++   V      H  LLEV+ + +   +
Sbjct: 68  SSVDVLLQEAVFEGTNRKNRVLQWREPEELRRLMDFGVRSAPSTHEELLEVLKKVVTYSV 127

Query: 539 TAIHSMFINK 568
              H  F+N+
Sbjct: 128 KTGHPYFVNQ 137


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 257 EQKSFYWENGYLVIKELI 310
           E+  FYW  G+L+I+  I
Sbjct: 318 ERIYFYWSFGFLIIQRFI 335


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 257 EQKSFYWENGYLVIK 301
           E+  FYW  G+L+++
Sbjct: 318 ERIYFYWSFGFLIVR 332


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 257 EQKSFYWENGYLVIK 301
           E+  FYW  G+L+++
Sbjct: 318 ERIYFYWSFGFLIVR 332


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 224 SELPQNYRLSEEQKSFYWEN 283
           SEL +N  LSE Q   +++N
Sbjct: 188 SELAENLGLSERQIKIWFQN 207


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
 Frame = +2

Query: 491 HPRLLEVISQFIGDDITAIHSMFINKP-PGTARHPPH 598
           +P  L + +  +  D        +  P PG + HPPH
Sbjct: 206 YPSALPISTSSLPSDFYRFSPTGLIPPHPGLSPHPPH 242


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
 Frame = +2

Query: 491 HPRLLEVISQFIGDDITAIHSMFINKP-PGTARHPPH 598
           +P  L + +  +  D        +  P PG + HPPH
Sbjct: 98  YPSALPISTSSLPSDFYRFSPTGLIPPHPGLSPHPPH 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,426
Number of Sequences: 336
Number of extensions: 3606
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)