Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_N02
         (697 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0138 + 999809-999821,1000456-1001341,1001424-1003221,10037...    29   4.7  
01_01_1099 - 8700627-8700710,8701148-8701200,8701287-8701344,870...    28   6.2  
02_04_0092 + 19655747-19655825,19656362-19656567,19656990-196570...    28   8.1  

>02_01_0138 +
           999809-999821,1000456-1001341,1001424-1003221,
           1003716-1003805,1004034-1004111,1004513-1004518,
           1004849-1004958,1005174-1005369
          Length = 1058

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +2

Query: 335 KQRFLQICKGIVDSPVMIVKEQALFEKNLKPEEYINKLQEI-LYD 466
           + R LQIC GI  SPV +   Q   ++N    E+I+ L+E+ +YD
Sbjct: 339 QMRSLQICSGITASPVQVSTSQV--DQN----EWISSLRELTIYD 377


>01_01_1099 -
           8700627-8700710,8701148-8701200,8701287-8701344,
           8701886-8702032,8702386-8702448,8702559-8702630,
           8703154-8703234,8703312-8703362,8703519-8703615,
           8704154-8704384,8704882-8705142,8705231-8705394,
           8705547-8705586,8707223-8707323
          Length = 500

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +2

Query: 506 EVISQFIGDDITAIHSMFINKPPGTARHPPHQDLFYFPIRPVDKIIGSXTAVDHVNKDNG 685
           E +SQ IGD+ T   +     P G      H+ L    I+  + +I + T VD +  + G
Sbjct: 350 EYLSQLIGDNYTGDRNEMALLPEGITELLHHKMLPLPLIKCKNVVILAATNVDELETEWG 409

Query: 686 CL 691
           CL
Sbjct: 410 CL 411


>02_04_0092 +
           19655747-19655825,19656362-19656567,19656990-19657096,
           19657189-19657291,19657699-19657881,19657972-19658094
          Length = 266

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +2

Query: 329 SYKQRFLQICKGIVDSPVMIVKEQALFEKNLKPEEY-INKLQEILYDDVF 475
           S    F    KG   SP+ I+K+ A++   L+P E         + D+VF
Sbjct: 43  SLSPNFTTCSKGTYQSPINILKDDAVYNPKLEPLEMDYTAANTTIVDNVF 92


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,013,248
Number of Sequences: 37544
Number of extensions: 369562
Number of successful extensions: 656
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)